Gene : Phvul.L002243 P. vulgaris v2.1
Defline:  (1 of 4) K02893 - large subunit ribosomal protein L23Ae (RP-L23Ae, RPL23A) Genomic Order:  7
Name:  ? Phvul.L002243 Secondary Identifier:  ? PAC:37178984
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L002243 0.5kb upstream 0.5kb upstream 2023 true scaffold_15: 51027-53049 Phaseolus vulgaris
Phvul.L002243 0.5kb upstream 0.5kb upstream 500 false scaffold_15: 51027-51526 Phaseolus vulgaris
Phvul.L002243 0.5kb downstream 0.5kb downstream 2023 true scaffold_15: 51527-53549 Phaseolus vulgaris
Phvul.L002243 0.5kb downstream 0.5kb downstream 500 false scaffold_15: 53050-53549 Phaseolus vulgaris
Phvul.L002243 1.0kb upstream 1.0kb upstream 2523 true scaffold_15: 50527-53049 Phaseolus vulgaris
Phvul.L002243 1.0kb upstream 1.0kb upstream 1000 false scaffold_15: 50527-51526 Phaseolus vulgaris
Phvul.L002243 1.0kb downstream 1.0kb downstream 2523 true scaffold_15: 51527-54049 Phaseolus vulgaris
Phvul.L002243 1.0kb downstream 1.0kb downstream 1000 false scaffold_15: 53050-54049 Phaseolus vulgaris
Phvul.L002243 2.0kb upstream 2.0kb upstream 3523 true scaffold_15: 49527-53049 Phaseolus vulgaris
Phvul.L002243 2.0kb upstream 2.0kb upstream 2000 false scaffold_15: 49527-51526 Phaseolus vulgaris
Phvul.L002243 2.0kb downstream 2.0kb downstream 3523 true scaffold_15: 51527-55049 Phaseolus vulgaris
Phvul.L002243 2.0kb downstream 2.0kb downstream 2000 false scaffold_15: 53050-55049 Phaseolus vulgaris
Phvul.L002243 5.0kb upstream 5.0kb upstream 6523 true scaffold_15: 46527-53049 Phaseolus vulgaris
Phvul.L002243 5.0kb upstream 5.0kb upstream 5000 false scaffold_15: 46527-51526 Phaseolus vulgaris
Phvul.L002243 5.0kb downstream 5.0kb downstream 6523 true scaffold_15: 51527-58049 Phaseolus vulgaris
Phvul.L002243 5.0kb downstream 5.0kb downstream 5000 false scaffold_15: 53050-58049 Phaseolus vulgaris
Phvul.L002243 10.0kb upstream 10.0kb upstream 11523 true scaffold_15: 41527-53049 Phaseolus vulgaris
Phvul.L002243 10.0kb upstream 10.0kb upstream 10000 false scaffold_15: 41527-51526 Phaseolus vulgaris
Phvul.L002243 10.0kb downstream 10.0kb downstream 11523 true scaffold_15: 51527-63049 Phaseolus vulgaris
Phvul.L002243 10.0kb downstream 10.0kb downstream 10000 false scaffold_15: 53050-63049 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315036 5265 Fabidae View MSA
124072262 5270 Rosid View MSA
123746910 5271 Pentapetalae View MSA
122787789 5272 Eudicot View MSA
122048184 5273 Angiosperm View MSA
121343898 5274 Embryophyte View MSA
123423801 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 124.965 0.0 329.066 High  
cufflinks 158.345 0.0 423.932 High  
cufflinks 76.1803 0.0 197.138 High  
cufflinks 170.458 0.0 460.228 High High
cufflinks 106.882 0.0 278.39 High  
cufflinks 85.1443 0.0 220.786 High  
cufflinks 105.152 0.0 274.836 High  
cufflinks 113.559 0.0 298.181 High  
cufflinks 162.22 0.0 436.723 High  
cufflinks 35.4876 0.0 93.6197   Low
cufflinks 112.052 0.0 292.688 High  

0 Strain