Gene : Phvul.011G069900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11177//PTHR11177:SF186 - CHITINASE // SUBFAMILY NOT NAMED Genomic Order:  720
Name:  ? Phvul.011G069900 Secondary Identifier:  ? PAC:37156092
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6902 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G069900 0.5kb upstream 0.5kb upstream 1421 true Chr11: 6279845-6281265 Phaseolus vulgaris
Phvul.011G069900 0.5kb upstream 0.5kb upstream 500 false Chr11: 6280766-6281265 Phaseolus vulgaris
Phvul.011G069900 0.5kb downstream 0.5kb downstream 1421 true Chr11: 6279345-6280765 Phaseolus vulgaris
Phvul.011G069900 0.5kb downstream 0.5kb downstream 500 false Chr11: 6279345-6279844 Phaseolus vulgaris
Phvul.011G069900 1.0kb upstream 1.0kb upstream 1921 true Chr11: 6279845-6281765 Phaseolus vulgaris
Phvul.011G069900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6280766-6281765 Phaseolus vulgaris
Phvul.011G069900 1.0kb downstream 1.0kb downstream 1921 true Chr11: 6278845-6280765 Phaseolus vulgaris
Phvul.011G069900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6278845-6279844 Phaseolus vulgaris
Phvul.011G069900 2.0kb upstream 2.0kb upstream 2921 true Chr11: 6279845-6282765 Phaseolus vulgaris
Phvul.011G069900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6280766-6282765 Phaseolus vulgaris
Phvul.011G069900 2.0kb downstream 2.0kb downstream 2921 true Chr11: 6277845-6280765 Phaseolus vulgaris
Phvul.011G069900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6277845-6279844 Phaseolus vulgaris
Phvul.011G069900 5.0kb upstream 5.0kb upstream 5921 true Chr11: 6279845-6285765 Phaseolus vulgaris
Phvul.011G069900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6280766-6285765 Phaseolus vulgaris
Phvul.011G069900 5.0kb downstream 5.0kb downstream 5921 true Chr11: 6274845-6280765 Phaseolus vulgaris
Phvul.011G069900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6274845-6279844 Phaseolus vulgaris
Phvul.011G069900 10.0kb upstream 10.0kb upstream 10921 true Chr11: 6279845-6290765 Phaseolus vulgaris
Phvul.011G069900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6280766-6290765 Phaseolus vulgaris
Phvul.011G069900 10.0kb downstream 10.0kb downstream 10921 true Chr11: 6269845-6280765 Phaseolus vulgaris
Phvul.011G069900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6269845-6279844 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299909 5265 Fabidae View MSA
124072600 5270 Rosid View MSA
123749602 5271 Pentapetalae View MSA
122797171 5272 Eudicot View MSA
122049953 5273 Angiosperm View MSA
121348698 5274 Embryophyte View MSA
123380978 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0413559 0.0 0.20496 Low Low
cufflinks 0.742682 0.0 2.82755    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.957434 0.0 3.53591    
cufflinks 0.424937 0.0 1.69324 Low  
cufflinks 0.0537415 0.0 0.259115 Low Low
cufflinks 0.662918 0.0 2.53587    
cufflinks 0.279483 0.0 1.14996 Low  
cufflinks 1.57534 0.0 5.57365   High
cufflinks 0.335011 0.0 1.36048    
cufflinks 0.247855 0.0 1.02892 Low  

0 Strain