Gene : Phvul.L006443 P. vulgaris v2.1
Defline:  (1 of 4) PTHR21717:SF9 - PROTEIN TBF1 Genomic Order:  49
Name:  ? Phvul.L006443 Secondary Identifier:  ? PAC:37178896
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L006443 0.5kb upstream 0.5kb upstream 6378 true scaffold_15: 412769-419146 Phaseolus vulgaris
Phvul.L006443 0.5kb upstream 0.5kb upstream 500 false scaffold_15: 412769-413268 Phaseolus vulgaris
Phvul.L006443 0.5kb downstream 0.5kb downstream 6378 true scaffold_15: 413269-419646 Phaseolus vulgaris
Phvul.L006443 0.5kb downstream 0.5kb downstream 500 false scaffold_15: 419147-419646 Phaseolus vulgaris
Phvul.L006443 1.0kb upstream 1.0kb upstream 6878 true scaffold_15: 412269-419146 Phaseolus vulgaris
Phvul.L006443 1.0kb upstream 1.0kb upstream 1000 false scaffold_15: 412269-413268 Phaseolus vulgaris
Phvul.L006443 1.0kb downstream 1.0kb downstream 6878 true scaffold_15: 413269-420146 Phaseolus vulgaris
Phvul.L006443 1.0kb downstream 1.0kb downstream 1000 false scaffold_15: 419147-420146 Phaseolus vulgaris
Phvul.L006443 2.0kb upstream 2.0kb upstream 7878 true scaffold_15: 411269-419146 Phaseolus vulgaris
Phvul.L006443 2.0kb upstream 2.0kb upstream 2000 false scaffold_15: 411269-413268 Phaseolus vulgaris
Phvul.L006443 2.0kb downstream 2.0kb downstream 7878 true scaffold_15: 413269-421146 Phaseolus vulgaris
Phvul.L006443 2.0kb downstream 2.0kb downstream 2000 false scaffold_15: 419147-421146 Phaseolus vulgaris
Phvul.L006443 5.0kb upstream 5.0kb upstream 10878 true scaffold_15: 408269-419146 Phaseolus vulgaris
Phvul.L006443 5.0kb upstream 5.0kb upstream 5000 false scaffold_15: 408269-413268 Phaseolus vulgaris
Phvul.L006443 5.0kb downstream 5.0kb downstream 10878 true scaffold_15: 413269-424146 Phaseolus vulgaris
Phvul.L006443 5.0kb downstream 5.0kb downstream 5000 false scaffold_15: 419147-424146 Phaseolus vulgaris
Phvul.L006443 10.0kb upstream 10.0kb upstream 15878 true scaffold_15: 403269-419146 Phaseolus vulgaris
Phvul.L006443 10.0kb upstream 10.0kb upstream 10000 false scaffold_15: 403269-413268 Phaseolus vulgaris
Phvul.L006443 10.0kb downstream 10.0kb downstream 15878 true scaffold_15: 413269-429146 Phaseolus vulgaris
Phvul.L006443 10.0kb downstream 10.0kb downstream 10000 false scaffold_15: 419147-429146 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308897 5265 Fabidae View MSA
124063345 5270 Rosid View MSA
123753061 5271 Pentapetalae View MSA
122788041 5272 Eudicot View MSA
122049318 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348439 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.36582 0.0 8.72922    
cufflinks 3.22254 0.0 15.7027    
cufflinks 1.4724 0.0 7.19165   Low
cufflinks 2.77397 0.0 10.0945    
cufflinks 5.18812 0.0 16.5396    
cufflinks 1.3276 0.0 6.45966   Low
cufflinks 5.22858 0.0 26.7352    
cufflinks 4.38083 0.0 17.5488    
cufflinks 6.97916 0.0 24.2831    
cufflinks 12.9771 0.0 49.2455   High
cufflinks 4.13878 0.0 14.0159    

0 Strain