Gene : Phvul.L005543 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15371:SF2 - OUTER ENVELOPE PORE PROTEIN 16-1, CHLOROPLASTIC Genomic Order:  40
Name:  ? Phvul.L005543 Secondary Identifier:  ? PAC:37179019
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L005543 0.5kb upstream 0.5kb upstream 3383 true scaffold_15: 332775-336157 Phaseolus vulgaris
Phvul.L005543 0.5kb upstream 0.5kb upstream 500 false scaffold_15: 335658-336157 Phaseolus vulgaris
Phvul.L005543 0.5kb downstream 0.5kb downstream 3383 true scaffold_15: 332275-335657 Phaseolus vulgaris
Phvul.L005543 0.5kb downstream 0.5kb downstream 500 false scaffold_15: 332275-332774 Phaseolus vulgaris
Phvul.L005543 1.0kb upstream 1.0kb upstream 3883 true scaffold_15: 332775-336657 Phaseolus vulgaris
Phvul.L005543 1.0kb upstream 1.0kb upstream 1000 false scaffold_15: 335658-336657 Phaseolus vulgaris
Phvul.L005543 1.0kb downstream 1.0kb downstream 3883 true scaffold_15: 331775-335657 Phaseolus vulgaris
Phvul.L005543 1.0kb downstream 1.0kb downstream 1000 false scaffold_15: 331775-332774 Phaseolus vulgaris
Phvul.L005543 2.0kb upstream 2.0kb upstream 4883 true scaffold_15: 332775-337657 Phaseolus vulgaris
Phvul.L005543 2.0kb upstream 2.0kb upstream 2000 false scaffold_15: 335658-337657 Phaseolus vulgaris
Phvul.L005543 2.0kb downstream 2.0kb downstream 4883 true scaffold_15: 330775-335657 Phaseolus vulgaris
Phvul.L005543 2.0kb downstream 2.0kb downstream 2000 false scaffold_15: 330775-332774 Phaseolus vulgaris
Phvul.L005543 5.0kb upstream 5.0kb upstream 7883 true scaffold_15: 332775-340657 Phaseolus vulgaris
Phvul.L005543 5.0kb upstream 5.0kb upstream 5000 false scaffold_15: 335658-340657 Phaseolus vulgaris
Phvul.L005543 5.0kb downstream 5.0kb downstream 7883 true scaffold_15: 327775-335657 Phaseolus vulgaris
Phvul.L005543 5.0kb downstream 5.0kb downstream 5000 false scaffold_15: 327775-332774 Phaseolus vulgaris
Phvul.L005543 10.0kb upstream 10.0kb upstream 12883 true scaffold_15: 332775-345657 Phaseolus vulgaris
Phvul.L005543 10.0kb upstream 10.0kb upstream 10000 false scaffold_15: 335658-345657 Phaseolus vulgaris
Phvul.L005543 10.0kb downstream 10.0kb downstream 12883 true scaffold_15: 322775-335657 Phaseolus vulgaris
Phvul.L005543 10.0kb downstream 10.0kb downstream 10000 false scaffold_15: 322775-332774 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304179 5265 Fabidae View MSA
124068444 5270 Rosid View MSA
123739321 5271 Pentapetalae View MSA
122787422 5272 Eudicot View MSA
122042494 5273 Angiosperm View MSA
121351081 5274 Embryophyte View MSA
123382000 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.4871 0.0 61.7985    
cufflinks 12.4188 0.0 34.428    
cufflinks 23.7948 0.0 62.6745    
cufflinks 30.9323 0.0 80.6031   High
cufflinks 21.8383 0.0 58.2774    
cufflinks 11.8852 0.0 33.0514    
cufflinks 12.0163 0.0 33.268    
cufflinks 8.12101 0.0 23.2233   Low
cufflinks 12.6992 0.0 35.0979    
cufflinks 17.976 0.0 48.4625    
cufflinks 26.8528 0.0 70.4514   High

0 Strain