Gene : Phvul.L009543 P. vulgaris v2.1
Defline:  (1 of 1) 1.17.1.4 - Xanthine dehydrogenase / Xanthine/NAD(+) oxidoreductase Genomic Order:  80
Name:  ? Phvul.L009543 Secondary Identifier:  ? PAC:37178944
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5695 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6596 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6606 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6608 Phaseolus vulgaris pathologic  
Pvulgaris SALVADEHYPOX-PWY Phaseolus vulgaris pathologic  
Pvulgaris URSIN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L009543 0.5kb upstream 0.5kb upstream 12824 true scaffold_15: 639459-652282 Phaseolus vulgaris
Phvul.L009543 0.5kb upstream 0.5kb upstream 500 false scaffold_15: 639459-639958 Phaseolus vulgaris
Phvul.L009543 0.5kb downstream 0.5kb downstream 12824 true scaffold_15: 639959-652782 Phaseolus vulgaris
Phvul.L009543 0.5kb downstream 0.5kb downstream 500 false scaffold_15: 652283-652782 Phaseolus vulgaris
Phvul.L009543 1.0kb upstream 1.0kb upstream 13324 true scaffold_15: 638959-652282 Phaseolus vulgaris
Phvul.L009543 1.0kb upstream 1.0kb upstream 1000 false scaffold_15: 638959-639958 Phaseolus vulgaris
Phvul.L009543 1.0kb downstream 1.0kb downstream 13324 true scaffold_15: 639959-653282 Phaseolus vulgaris
Phvul.L009543 1.0kb downstream 1.0kb downstream 1000 false scaffold_15: 652283-653282 Phaseolus vulgaris
Phvul.L009543 2.0kb upstream 2.0kb upstream 14324 true scaffold_15: 637959-652282 Phaseolus vulgaris
Phvul.L009543 2.0kb upstream 2.0kb upstream 2000 false scaffold_15: 637959-639958 Phaseolus vulgaris
Phvul.L009543 2.0kb downstream 2.0kb downstream 14324 true scaffold_15: 639959-654282 Phaseolus vulgaris
Phvul.L009543 2.0kb downstream 2.0kb downstream 2000 false scaffold_15: 652283-654282 Phaseolus vulgaris
Phvul.L009543 5.0kb upstream 5.0kb upstream 17324 true scaffold_15: 634959-652282 Phaseolus vulgaris
Phvul.L009543 5.0kb upstream 5.0kb upstream 5000 false scaffold_15: 634959-639958 Phaseolus vulgaris
Phvul.L009543 5.0kb downstream 5.0kb downstream 17324 true scaffold_15: 639959-657282 Phaseolus vulgaris
Phvul.L009543 5.0kb downstream 5.0kb downstream 5000 false scaffold_15: 652283-657282 Phaseolus vulgaris
Phvul.L009543 10.0kb upstream 10.0kb upstream 22324 true scaffold_15: 629959-652282 Phaseolus vulgaris
Phvul.L009543 10.0kb upstream 10.0kb upstream 10000 false scaffold_15: 629959-639958 Phaseolus vulgaris
Phvul.L009543 10.0kb downstream 10.0kb downstream 22324 true scaffold_15: 639959-662282 Phaseolus vulgaris
Phvul.L009543 10.0kb downstream 10.0kb downstream 10000 false scaffold_15: 652283-662282 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309009 5265 Fabidae View MSA
124061487 5270 Rosid View MSA
123746349 5271 Pentapetalae View MSA
122793870 5272 Eudicot View MSA
122051504 5273 Angiosperm View MSA
121345384 5274 Embryophyte View MSA
123426829 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.85271 0.0 15.2477    
cufflinks 3.85067 0.0 10.2896    
cufflinks 6.14879 0.0 15.9862    
cufflinks 3.30127 0.0 9.00817    
cufflinks 5.42168 0.0 14.2402    
cufflinks 3.96791 0.0 10.5723    
cufflinks 11.4868 0.0 29.7644    
cufflinks 33.5118 0.0 94.1285 High High
cufflinks 18.9538 0.0 50.1347   High
cufflinks 6.15087 0.0 16.01    
cufflinks 2.97963 0.0 8.17471   Low

0 Strain