Gene : Phvul.L007543 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11040//PTHR11040:SF23 - ZINC/IRON TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  60
Name:  ? Phvul.L007543 Secondary Identifier:  ? PAC:37178906
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L007543 0.5kb upstream 0.5kb upstream 2511 true scaffold_15: 504259-506769 Phaseolus vulgaris
Phvul.L007543 0.5kb upstream 0.5kb upstream 500 false scaffold_15: 506270-506769 Phaseolus vulgaris
Phvul.L007543 0.5kb downstream 0.5kb downstream 2511 true scaffold_15: 503759-506269 Phaseolus vulgaris
Phvul.L007543 0.5kb downstream 0.5kb downstream 500 false scaffold_15: 503759-504258 Phaseolus vulgaris
Phvul.L007543 1.0kb upstream 1.0kb upstream 3011 true scaffold_15: 504259-507269 Phaseolus vulgaris
Phvul.L007543 1.0kb upstream 1.0kb upstream 1000 false scaffold_15: 506270-507269 Phaseolus vulgaris
Phvul.L007543 1.0kb downstream 1.0kb downstream 3011 true scaffold_15: 503259-506269 Phaseolus vulgaris
Phvul.L007543 1.0kb downstream 1.0kb downstream 1000 false scaffold_15: 503259-504258 Phaseolus vulgaris
Phvul.L007543 2.0kb upstream 2.0kb upstream 4011 true scaffold_15: 504259-508269 Phaseolus vulgaris
Phvul.L007543 2.0kb upstream 2.0kb upstream 2000 false scaffold_15: 506270-508269 Phaseolus vulgaris
Phvul.L007543 2.0kb downstream 2.0kb downstream 4011 true scaffold_15: 502259-506269 Phaseolus vulgaris
Phvul.L007543 2.0kb downstream 2.0kb downstream 2000 false scaffold_15: 502259-504258 Phaseolus vulgaris
Phvul.L007543 5.0kb upstream 5.0kb upstream 7011 true scaffold_15: 504259-511269 Phaseolus vulgaris
Phvul.L007543 5.0kb upstream 5.0kb upstream 5000 false scaffold_15: 506270-511269 Phaseolus vulgaris
Phvul.L007543 5.0kb downstream 5.0kb downstream 7011 true scaffold_15: 499259-506269 Phaseolus vulgaris
Phvul.L007543 5.0kb downstream 5.0kb downstream 5000 false scaffold_15: 499259-504258 Phaseolus vulgaris
Phvul.L007543 10.0kb upstream 10.0kb upstream 12011 true scaffold_15: 504259-516269 Phaseolus vulgaris
Phvul.L007543 10.0kb upstream 10.0kb upstream 10000 false scaffold_15: 506270-516269 Phaseolus vulgaris
Phvul.L007543 10.0kb downstream 10.0kb downstream 12011 true scaffold_15: 494259-506269 Phaseolus vulgaris
Phvul.L007543 10.0kb downstream 10.0kb downstream 10000 false scaffold_15: 494259-504258 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303991 5265 Fabidae View MSA
124065835 5270 Rosid View MSA
123739218 5271 Pentapetalae View MSA
122792201 5272 Eudicot View MSA
122044792 5273 Angiosperm View MSA
121349012 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.73163 0.0 22.3608    
cufflinks 5.91027 0.0 17.6326    
cufflinks 0.0545879 0.0 0.254964 Low Low
cufflinks 3.36292 0.0 10.6973    
cufflinks 1.5505 0.0 5.39613    
cufflinks 0.202884 0.0 0.836776 Low Low
cufflinks 80.0428 0.0 210.432 High High
cufflinks 20.7986 0.0 55.2527    
cufflinks 320.098 0.0 976.618 High High
cufflinks 2.36499 0.0 7.84814    
cufflinks 1.61551 0.0 5.60106    

0 Strain