Gene : Phvul.L008543 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12526:SF364 - GLYCOSYL TRANSFERASE FAMILY PROTEIN Genomic Order:  70
Name:  ? Phvul.L008543 Secondary Identifier:  ? PAC:37178908
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L008543 0.5kb upstream 0.5kb upstream 1964 true scaffold_15: 555365-557328 Phaseolus vulgaris
Phvul.L008543 0.5kb upstream 0.5kb upstream 500 false scaffold_15: 556829-557328 Phaseolus vulgaris
Phvul.L008543 0.5kb downstream 0.5kb downstream 1964 true scaffold_15: 554865-556828 Phaseolus vulgaris
Phvul.L008543 0.5kb downstream 0.5kb downstream 500 false scaffold_15: 554865-555364 Phaseolus vulgaris
Phvul.L008543 1.0kb upstream 1.0kb upstream 2464 true scaffold_15: 555365-557828 Phaseolus vulgaris
Phvul.L008543 1.0kb upstream 1.0kb upstream 1000 false scaffold_15: 556829-557828 Phaseolus vulgaris
Phvul.L008543 1.0kb downstream 1.0kb downstream 2464 true scaffold_15: 554365-556828 Phaseolus vulgaris
Phvul.L008543 1.0kb downstream 1.0kb downstream 1000 false scaffold_15: 554365-555364 Phaseolus vulgaris
Phvul.L008543 2.0kb upstream 2.0kb upstream 3464 true scaffold_15: 555365-558828 Phaseolus vulgaris
Phvul.L008543 2.0kb upstream 2.0kb upstream 2000 false scaffold_15: 556829-558828 Phaseolus vulgaris
Phvul.L008543 2.0kb downstream 2.0kb downstream 3464 true scaffold_15: 553365-556828 Phaseolus vulgaris
Phvul.L008543 2.0kb downstream 2.0kb downstream 2000 false scaffold_15: 553365-555364 Phaseolus vulgaris
Phvul.L008543 5.0kb upstream 5.0kb upstream 6464 true scaffold_15: 555365-561828 Phaseolus vulgaris
Phvul.L008543 5.0kb upstream 5.0kb upstream 5000 false scaffold_15: 556829-561828 Phaseolus vulgaris
Phvul.L008543 5.0kb downstream 5.0kb downstream 6464 true scaffold_15: 550365-556828 Phaseolus vulgaris
Phvul.L008543 5.0kb downstream 5.0kb downstream 5000 false scaffold_15: 550365-555364 Phaseolus vulgaris
Phvul.L008543 10.0kb upstream 10.0kb upstream 11464 true scaffold_15: 555365-566828 Phaseolus vulgaris
Phvul.L008543 10.0kb upstream 10.0kb upstream 10000 false scaffold_15: 556829-566828 Phaseolus vulgaris
Phvul.L008543 10.0kb downstream 10.0kb downstream 11464 true scaffold_15: 545365-556828 Phaseolus vulgaris
Phvul.L008543 10.0kb downstream 10.0kb downstream 10000 false scaffold_15: 545365-555364 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305628 5265 Fabidae View MSA
124067109 5270 Rosid View MSA
123737440 5271 Pentapetalae View MSA
122788873 5272 Eudicot View MSA
122049577 5273 Angiosperm View MSA
121345935 5274 Embryophyte View MSA
123380294 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.566602 0.0 2.0969    
cufflinks 0.335108 0.0 1.29329 Low  
cufflinks 0.0778312 0.0 0.339225 Low Low
cufflinks 0.295716 0.0 1.15496 Low  
cufflinks 0.275049 0.0 1.08293 Low  
cufflinks 0.0578262 0.0 0.259523 Low Low
cufflinks 0.441075 0.0 1.66271 Low  
cufflinks 0.182078 0.0 0.735822 Low  
cufflinks 1.15447 0.0 3.98459   High
cufflinks 0.202495 0.0 0.814215 Low  
cufflinks 0.75939 0.0 2.74443   High

0 Strain