Gene : Phvul.011G062800 P. vulgaris v2.1
Defline:  (1 of 2) K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Genomic Order:  648
Name:  ? Phvul.011G062800 Secondary Identifier:  ? PAC:37156407
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G062800 0.5kb upstream 0.5kb upstream 6526 true Chr11: 5608495-5615020 Phaseolus vulgaris
Phvul.011G062800 0.5kb upstream 0.5kb upstream 500 false Chr11: 5608495-5608994 Phaseolus vulgaris
Phvul.011G062800 0.5kb downstream 0.5kb downstream 6526 true Chr11: 5608995-5615520 Phaseolus vulgaris
Phvul.011G062800 0.5kb downstream 0.5kb downstream 500 false Chr11: 5615021-5615520 Phaseolus vulgaris
Phvul.011G062800 1.0kb upstream 1.0kb upstream 7026 true Chr11: 5607995-5615020 Phaseolus vulgaris
Phvul.011G062800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5607995-5608994 Phaseolus vulgaris
Phvul.011G062800 1.0kb downstream 1.0kb downstream 7026 true Chr11: 5608995-5616020 Phaseolus vulgaris
Phvul.011G062800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5615021-5616020 Phaseolus vulgaris
Phvul.011G062800 2.0kb upstream 2.0kb upstream 8026 true Chr11: 5606995-5615020 Phaseolus vulgaris
Phvul.011G062800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5606995-5608994 Phaseolus vulgaris
Phvul.011G062800 2.0kb downstream 2.0kb downstream 8026 true Chr11: 5608995-5617020 Phaseolus vulgaris
Phvul.011G062800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5615021-5617020 Phaseolus vulgaris
Phvul.011G062800 5.0kb upstream 5.0kb upstream 11026 true Chr11: 5603995-5615020 Phaseolus vulgaris
Phvul.011G062800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5603995-5608994 Phaseolus vulgaris
Phvul.011G062800 5.0kb downstream 5.0kb downstream 11026 true Chr11: 5608995-5620020 Phaseolus vulgaris
Phvul.011G062800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5615021-5620020 Phaseolus vulgaris
Phvul.011G062800 10.0kb upstream 10.0kb upstream 16026 true Chr11: 5598995-5615020 Phaseolus vulgaris
Phvul.011G062800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5598995-5608994 Phaseolus vulgaris
Phvul.011G062800 10.0kb downstream 10.0kb downstream 16026 true Chr11: 5608995-5625020 Phaseolus vulgaris
Phvul.011G062800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5615021-5625020 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306311 5265 Fabidae View MSA
124064309 5270 Rosid View MSA
123736600 5271 Pentapetalae View MSA
122793293 5272 Eudicot View MSA
122047667 5273 Angiosperm View MSA
121345143 5274 Embryophyte View MSA
123426820 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1225 0.0 26.5384    
cufflinks 13.5116 0.0 35.0447    
cufflinks 11.6078 0.0 30.2358    
cufflinks 7.07435 0.0 19.1539   Low
cufflinks 8.62194 0.0 22.933    
cufflinks 13.4347 0.0 34.8441    
cufflinks 11.5881 0.0 30.1904    
cufflinks 10.6816 0.0 27.8752    
cufflinks 10.6244 0.0 27.8192    
cufflinks 21.159 0.0 54.7567   High
cufflinks 10.6383 0.0 27.89    

0 Strain