Gene : Phvul.011G055500 P. vulgaris v2.1
Defline:  (1 of 3) K11968 - ariadne-1 (ARIH1) Genomic Order:  571
Name:  ? Phvul.011G055500 Secondary Identifier:  ? PAC:37156578
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7511 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G055500 0.5kb upstream 0.5kb upstream 8530 true Chr11: 4883359-4891888 Phaseolus vulgaris
Phvul.011G055500 0.5kb upstream 0.5kb upstream 500 false Chr11: 4891389-4891888 Phaseolus vulgaris
Phvul.011G055500 0.5kb downstream 0.5kb downstream 8530 true Chr11: 4882859-4891388 Phaseolus vulgaris
Phvul.011G055500 0.5kb downstream 0.5kb downstream 500 false Chr11: 4882859-4883358 Phaseolus vulgaris
Phvul.011G055500 1.0kb upstream 1.0kb upstream 9030 true Chr11: 4883359-4892388 Phaseolus vulgaris
Phvul.011G055500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4891389-4892388 Phaseolus vulgaris
Phvul.011G055500 1.0kb downstream 1.0kb downstream 9030 true Chr11: 4882359-4891388 Phaseolus vulgaris
Phvul.011G055500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4882359-4883358 Phaseolus vulgaris
Phvul.011G055500 2.0kb upstream 2.0kb upstream 10030 true Chr11: 4883359-4893388 Phaseolus vulgaris
Phvul.011G055500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4891389-4893388 Phaseolus vulgaris
Phvul.011G055500 2.0kb downstream 2.0kb downstream 10030 true Chr11: 4881359-4891388 Phaseolus vulgaris
Phvul.011G055500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4881359-4883358 Phaseolus vulgaris
Phvul.011G055500 5.0kb upstream 5.0kb upstream 13030 true Chr11: 4883359-4896388 Phaseolus vulgaris
Phvul.011G055500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4891389-4896388 Phaseolus vulgaris
Phvul.011G055500 5.0kb downstream 5.0kb downstream 13030 true Chr11: 4878359-4891388 Phaseolus vulgaris
Phvul.011G055500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4878359-4883358 Phaseolus vulgaris
Phvul.011G055500 10.0kb upstream 10.0kb upstream 18030 true Chr11: 4883359-4901388 Phaseolus vulgaris
Phvul.011G055500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4891389-4901388 Phaseolus vulgaris
Phvul.011G055500 10.0kb downstream 10.0kb downstream 18030 true Chr11: 4873359-4891388 Phaseolus vulgaris
Phvul.011G055500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4873359-4883358 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314915 5265 Fabidae View MSA
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.4219 0.0 63.4274    
cufflinks 19.8427 0.0 51.3111    
cufflinks 25.0315 0.0 65.0764    
cufflinks 14.8456 0.0 38.4852   Low
cufflinks 14.9474 0.0 38.7226   Low
cufflinks 24.3228 0.0 63.1285    
cufflinks 21.1058 0.0 54.6216    
cufflinks 21.6125 0.0 55.9853    
cufflinks 21.9332 0.0 56.786    
cufflinks 38.7222 0.0 102.846 High High
cufflinks 17.1238 0.0 44.2762    

0 Strain