Gene : Phvul.011G056548 P. vulgaris v2.1
Defline:  (1 of 1) K05581 - NAD(P)H-quinone oxidoreductase subunit J (ndhJ) Genomic Order:  584
Name:  ? Phvul.011G056548 Secondary Identifier:  ? PAC:37156243
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G056548 0.5kb upstream 0.5kb upstream 1676 true Chr11: 4997849-4999524 Phaseolus vulgaris
Phvul.011G056548 0.5kb upstream 0.5kb upstream 500 false Chr11: 4997849-4998348 Phaseolus vulgaris
Phvul.011G056548 0.5kb downstream 0.5kb downstream 1676 true Chr11: 4998349-5000024 Phaseolus vulgaris
Phvul.011G056548 0.5kb downstream 0.5kb downstream 500 false Chr11: 4999525-5000024 Phaseolus vulgaris
Phvul.011G056548 1.0kb upstream 1.0kb upstream 2176 true Chr11: 4997349-4999524 Phaseolus vulgaris
Phvul.011G056548 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4997349-4998348 Phaseolus vulgaris
Phvul.011G056548 1.0kb downstream 1.0kb downstream 2176 true Chr11: 4998349-5000524 Phaseolus vulgaris
Phvul.011G056548 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4999525-5000524 Phaseolus vulgaris
Phvul.011G056548 2.0kb upstream 2.0kb upstream 3176 true Chr11: 4996349-4999524 Phaseolus vulgaris
Phvul.011G056548 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4996349-4998348 Phaseolus vulgaris
Phvul.011G056548 2.0kb downstream 2.0kb downstream 3176 true Chr11: 4998349-5001524 Phaseolus vulgaris
Phvul.011G056548 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4999525-5001524 Phaseolus vulgaris
Phvul.011G056548 5.0kb upstream 5.0kb upstream 6176 true Chr11: 4993349-4999524 Phaseolus vulgaris
Phvul.011G056548 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4993349-4998348 Phaseolus vulgaris
Phvul.011G056548 5.0kb downstream 5.0kb downstream 6176 true Chr11: 4998349-5004524 Phaseolus vulgaris
Phvul.011G056548 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4999525-5004524 Phaseolus vulgaris
Phvul.011G056548 10.0kb upstream 10.0kb upstream 11176 true Chr11: 4988349-4999524 Phaseolus vulgaris
Phvul.011G056548 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4988349-4998348 Phaseolus vulgaris
Phvul.011G056548 10.0kb downstream 10.0kb downstream 11176 true Chr11: 4998349-5009524 Phaseolus vulgaris
Phvul.011G056548 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4999525-5009524 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297592 5265 Fabidae View MSA
124050410 5270 Rosid View MSA
123753609 5271 Pentapetalae View MSA
122797515 5272 Eudicot View MSA
122050391 5273 Angiosperm View MSA
121349421 5274 Embryophyte View MSA
123381301 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.467177 0.0 1.86003    
cufflinks 0.187393 0.0 0.811111 Low  
cufflinks 7.25932 0.0 22.1557   High
cufflinks 1.9428 0.0 6.98157    
cufflinks 0.944392 0.0 3.61617    
cufflinks 10.2026 0.0 30.0834   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.070083 0.0 0.328982 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.45652 0.0 5.32058    
cufflinks 0.165626 0.0 0.732776 Low  

0 Strain