Gene : Phvul.011G051900 P. vulgaris v2.1
Defline:  (1 of 2) K14569 - ribosome biogenesis protein BMS1 (BMS1) Genomic Order:  536
Name:  ? Phvul.011G051900 Secondary Identifier:  ? PAC:37154803
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G051900 0.5kb upstream 0.5kb upstream 8862 true Chr11: 4578245-4587106 Phaseolus vulgaris
Phvul.011G051900 0.5kb upstream 0.5kb upstream 500 false Chr11: 4578245-4578744 Phaseolus vulgaris
Phvul.011G051900 0.5kb downstream 0.5kb downstream 8862 true Chr11: 4578745-4587606 Phaseolus vulgaris
Phvul.011G051900 0.5kb downstream 0.5kb downstream 500 false Chr11: 4587107-4587606 Phaseolus vulgaris
Phvul.011G051900 1.0kb upstream 1.0kb upstream 9362 true Chr11: 4577745-4587106 Phaseolus vulgaris
Phvul.011G051900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4577745-4578744 Phaseolus vulgaris
Phvul.011G051900 1.0kb downstream 1.0kb downstream 9362 true Chr11: 4578745-4588106 Phaseolus vulgaris
Phvul.011G051900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4587107-4588106 Phaseolus vulgaris
Phvul.011G051900 2.0kb upstream 2.0kb upstream 10362 true Chr11: 4576745-4587106 Phaseolus vulgaris
Phvul.011G051900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4576745-4578744 Phaseolus vulgaris
Phvul.011G051900 2.0kb downstream 2.0kb downstream 10362 true Chr11: 4578745-4589106 Phaseolus vulgaris
Phvul.011G051900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4587107-4589106 Phaseolus vulgaris
Phvul.011G051900 5.0kb upstream 5.0kb upstream 13362 true Chr11: 4573745-4587106 Phaseolus vulgaris
Phvul.011G051900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4573745-4578744 Phaseolus vulgaris
Phvul.011G051900 5.0kb downstream 5.0kb downstream 13362 true Chr11: 4578745-4592106 Phaseolus vulgaris
Phvul.011G051900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4587107-4592106 Phaseolus vulgaris
Phvul.011G051900 10.0kb upstream 10.0kb upstream 18362 true Chr11: 4568745-4587106 Phaseolus vulgaris
Phvul.011G051900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4568745-4578744 Phaseolus vulgaris
Phvul.011G051900 10.0kb downstream 10.0kb downstream 18362 true Chr11: 4578745-4597106 Phaseolus vulgaris
Phvul.011G051900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4587107-4597106 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306986 5265 Fabidae View MSA
124068054 5270 Rosid View MSA
123746170 5271 Pentapetalae View MSA
122788558 5272 Eudicot View MSA
122050261 5273 Angiosperm View MSA
121345125 5274 Embryophyte View MSA
123424272 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.71797 0.0 7.47565   Low
cufflinks 9.30279 0.0 24.0461    
cufflinks 10.239 0.0 26.4838    
cufflinks 3.577 0.0 9.70582   Low
cufflinks 7.86151 0.0 20.379    
cufflinks 7.04706 0.0 18.2665    
cufflinks 12.5754 0.0 32.6901    
cufflinks 14.7248 0.0 38.5821   High
cufflinks 13.3676 0.0 34.7994    
cufflinks 14.6353 0.0 38.1765   High
cufflinks 6.0258 0.0 15.7316    

0 Strain