Gene : Phvul.011G051300 P. vulgaris v2.1
Defline:  (1 of 4) 4.1.1.19 - Arginine decarboxylase / L-arginine carboxy-lyase Genomic Order:  529
Name:  ? Phvul.011G051300 Secondary Identifier:  ? PAC:37155607
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris POLYAMINSYN3-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-43 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G051300 0.5kb upstream 0.5kb upstream 8929 true Chr11: 4532266-4541194 Phaseolus vulgaris
Phvul.011G051300 0.5kb upstream 0.5kb upstream 500 false Chr11: 4532266-4532765 Phaseolus vulgaris
Phvul.011G051300 0.5kb downstream 0.5kb downstream 8929 true Chr11: 4532766-4541694 Phaseolus vulgaris
Phvul.011G051300 0.5kb downstream 0.5kb downstream 500 false Chr11: 4541195-4541694 Phaseolus vulgaris
Phvul.011G051300 1.0kb upstream 1.0kb upstream 9429 true Chr11: 4531766-4541194 Phaseolus vulgaris
Phvul.011G051300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4531766-4532765 Phaseolus vulgaris
Phvul.011G051300 1.0kb downstream 1.0kb downstream 9429 true Chr11: 4532766-4542194 Phaseolus vulgaris
Phvul.011G051300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4541195-4542194 Phaseolus vulgaris
Phvul.011G051300 2.0kb upstream 2.0kb upstream 10429 true Chr11: 4530766-4541194 Phaseolus vulgaris
Phvul.011G051300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4530766-4532765 Phaseolus vulgaris
Phvul.011G051300 2.0kb downstream 2.0kb downstream 10429 true Chr11: 4532766-4543194 Phaseolus vulgaris
Phvul.011G051300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4541195-4543194 Phaseolus vulgaris
Phvul.011G051300 5.0kb upstream 5.0kb upstream 13429 true Chr11: 4527766-4541194 Phaseolus vulgaris
Phvul.011G051300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4527766-4532765 Phaseolus vulgaris
Phvul.011G051300 5.0kb downstream 5.0kb downstream 13429 true Chr11: 4532766-4546194 Phaseolus vulgaris
Phvul.011G051300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4541195-4546194 Phaseolus vulgaris
Phvul.011G051300 10.0kb upstream 10.0kb upstream 18429 true Chr11: 4522766-4541194 Phaseolus vulgaris
Phvul.011G051300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4522766-4532765 Phaseolus vulgaris
Phvul.011G051300 10.0kb downstream 10.0kb downstream 18429 true Chr11: 4532766-4551194 Phaseolus vulgaris
Phvul.011G051300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4541195-4551194 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253505 5265 Fabidae View MSA
123996074 5270 Rosid View MSA
123570610 5271 Pentapetalae View MSA
122796978 5272 Eudicot View MSA
122048497 5273 Angiosperm View MSA
121348486 5274 Embryophyte View MSA
123425712 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.256644 0.0 1.05675 Low Low
cufflinks 5.11638 0.0 18.2754    
cufflinks 13.8342 0.0 57.7007   High
cufflinks 0.927788 0.0 3.98775    
cufflinks 3.09967 0.0 12.8319    
cufflinks 2.05885 0.0 13.5841    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.06777 0.0 9.65439    
cufflinks 1.63044 0.0 11.5029    

0 Strain