Gene : Phvul.011G053400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR14289:SF16 - F-BOX ONLY PROTEIN 3 Genomic Order:  550
Name:  ? Phvul.011G053400 Secondary Identifier:  ? PAC:37157343
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G053400 0.5kb upstream 0.5kb upstream 4640 true Chr11: 4696975-4701614 Phaseolus vulgaris
Phvul.011G053400 0.5kb upstream 0.5kb upstream 500 false Chr11: 4696975-4697474 Phaseolus vulgaris
Phvul.011G053400 0.5kb downstream 0.5kb downstream 4640 true Chr11: 4697475-4702114 Phaseolus vulgaris
Phvul.011G053400 0.5kb downstream 0.5kb downstream 500 false Chr11: 4701615-4702114 Phaseolus vulgaris
Phvul.011G053400 1.0kb upstream 1.0kb upstream 5140 true Chr11: 4696475-4701614 Phaseolus vulgaris
Phvul.011G053400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4696475-4697474 Phaseolus vulgaris
Phvul.011G053400 1.0kb downstream 1.0kb downstream 5140 true Chr11: 4697475-4702614 Phaseolus vulgaris
Phvul.011G053400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4701615-4702614 Phaseolus vulgaris
Phvul.011G053400 2.0kb upstream 2.0kb upstream 6140 true Chr11: 4695475-4701614 Phaseolus vulgaris
Phvul.011G053400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4695475-4697474 Phaseolus vulgaris
Phvul.011G053400 2.0kb downstream 2.0kb downstream 6140 true Chr11: 4697475-4703614 Phaseolus vulgaris
Phvul.011G053400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4701615-4703614 Phaseolus vulgaris
Phvul.011G053400 5.0kb upstream 5.0kb upstream 9140 true Chr11: 4692475-4701614 Phaseolus vulgaris
Phvul.011G053400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4692475-4697474 Phaseolus vulgaris
Phvul.011G053400 5.0kb downstream 5.0kb downstream 9140 true Chr11: 4697475-4706614 Phaseolus vulgaris
Phvul.011G053400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4701615-4706614 Phaseolus vulgaris
Phvul.011G053400 10.0kb upstream 10.0kb upstream 14140 true Chr11: 4687475-4701614 Phaseolus vulgaris
Phvul.011G053400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4687475-4697474 Phaseolus vulgaris
Phvul.011G053400 10.0kb downstream 10.0kb downstream 14140 true Chr11: 4697475-4711614 Phaseolus vulgaris
Phvul.011G053400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4701615-4711614 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305112 5265 Fabidae View MSA
124069195 5270 Rosid View MSA
123748580 5271 Pentapetalae View MSA
122787325 5272 Eudicot View MSA
122044977 5273 Angiosperm View MSA
121344858 5274 Embryophyte View MSA
123425488 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.17 0.0 110.644   High
cufflinks 25.5617 0.0 103.888    
cufflinks 18.6715 0.0 69.0696    
cufflinks 28.5858 0.0 104.299   High
cufflinks 25.3355 0.0 101.025    
cufflinks 18.1199 0.0 74.5144    
cufflinks 16.0617 0.0 69.8796   Low
cufflinks 15.4598 0.0 65.0016   Low
cufflinks 18.8132 0.0 78.0422    
cufflinks 25.3965 0.0 92.6675    
cufflinks 20.7098 0.0 84.6331    

0 Strain