Gene : Phvul.011G040700 P. vulgaris v2.1
Defline:  (1 of 2) PF00225//PF13920 - Kinesin motor domain (Kinesin) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) Genomic Order:  423
Name:  ? Phvul.011G040700 Secondary Identifier:  ? PAC:37155719
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G040700 0.5kb upstream 0.5kb upstream 12041 true Chr11: 3690740-3702780 Phaseolus vulgaris
Phvul.011G040700 0.5kb upstream 0.5kb upstream 500 false Chr11: 3690740-3691239 Phaseolus vulgaris
Phvul.011G040700 0.5kb downstream 0.5kb downstream 12041 true Chr11: 3691240-3703280 Phaseolus vulgaris
Phvul.011G040700 0.5kb downstream 0.5kb downstream 500 false Chr11: 3702781-3703280 Phaseolus vulgaris
Phvul.011G040700 1.0kb upstream 1.0kb upstream 12541 true Chr11: 3690240-3702780 Phaseolus vulgaris
Phvul.011G040700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3690240-3691239 Phaseolus vulgaris
Phvul.011G040700 1.0kb downstream 1.0kb downstream 12541 true Chr11: 3691240-3703780 Phaseolus vulgaris
Phvul.011G040700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3702781-3703780 Phaseolus vulgaris
Phvul.011G040700 2.0kb upstream 2.0kb upstream 13541 true Chr11: 3689240-3702780 Phaseolus vulgaris
Phvul.011G040700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3689240-3691239 Phaseolus vulgaris
Phvul.011G040700 2.0kb downstream 2.0kb downstream 13541 true Chr11: 3691240-3704780 Phaseolus vulgaris
Phvul.011G040700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3702781-3704780 Phaseolus vulgaris
Phvul.011G040700 5.0kb upstream 5.0kb upstream 16541 true Chr11: 3686240-3702780 Phaseolus vulgaris
Phvul.011G040700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3686240-3691239 Phaseolus vulgaris
Phvul.011G040700 5.0kb downstream 5.0kb downstream 16541 true Chr11: 3691240-3707780 Phaseolus vulgaris
Phvul.011G040700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3702781-3707780 Phaseolus vulgaris
Phvul.011G040700 10.0kb upstream 10.0kb upstream 21541 true Chr11: 3681240-3702780 Phaseolus vulgaris
Phvul.011G040700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3681240-3691239 Phaseolus vulgaris
Phvul.011G040700 10.0kb downstream 10.0kb downstream 21541 true Chr11: 3691240-3712780 Phaseolus vulgaris
Phvul.011G040700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3702781-3712780 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297332 5265 Fabidae View MSA
124035993 5270 Rosid View MSA
123609422 5271 Pentapetalae View MSA
122644070 5272 Eudicot View MSA
122046423 5273 Angiosperm View MSA
123429039 5275 Viridiplantae View MSA
121350608 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.956947 0.0 4.95254   Low
cufflinks 6.57662 0.0 24.1382    
cufflinks 30.3339 0.0 119.243   High
cufflinks 3.02645 0.0 11.6456    
cufflinks 10.7081 0.0 37.7963    
cufflinks 25.4037 0.0 96.5946   High
cufflinks 7.44321 0.0 29.0443    
cufflinks 4.1936 0.0 16.6841    
cufflinks 8.97219 0.0 34.9035    
cufflinks 3.27603 0.0 15.1076    
cufflinks 9.36038 0.0 36.2497    

0 Strain