Gene : Phvul.011G040900 P. vulgaris v2.1
Genomic Order:  425 Name:  ? Phvul.011G040900
Secondary Identifier:  ? PAC:37155586
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G040900 0.5kb upstream 0.5kb upstream 7040 true Chr11: 3715905-3722944 Phaseolus vulgaris
Phvul.011G040900 0.5kb upstream 0.5kb upstream 500 false Chr11: 3715905-3716404 Phaseolus vulgaris
Phvul.011G040900 0.5kb downstream 0.5kb downstream 7040 true Chr11: 3716405-3723444 Phaseolus vulgaris
Phvul.011G040900 0.5kb downstream 0.5kb downstream 500 false Chr11: 3722945-3723444 Phaseolus vulgaris
Phvul.011G040900 1.0kb upstream 1.0kb upstream 7540 true Chr11: 3715405-3722944 Phaseolus vulgaris
Phvul.011G040900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3715405-3716404 Phaseolus vulgaris
Phvul.011G040900 1.0kb downstream 1.0kb downstream 7540 true Chr11: 3716405-3723944 Phaseolus vulgaris
Phvul.011G040900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3722945-3723944 Phaseolus vulgaris
Phvul.011G040900 2.0kb upstream 2.0kb upstream 8540 true Chr11: 3714405-3722944 Phaseolus vulgaris
Phvul.011G040900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3714405-3716404 Phaseolus vulgaris
Phvul.011G040900 2.0kb downstream 2.0kb downstream 8540 true Chr11: 3716405-3724944 Phaseolus vulgaris
Phvul.011G040900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3722945-3724944 Phaseolus vulgaris
Phvul.011G040900 5.0kb upstream 5.0kb upstream 11540 true Chr11: 3711405-3722944 Phaseolus vulgaris
Phvul.011G040900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3711405-3716404 Phaseolus vulgaris
Phvul.011G040900 5.0kb downstream 5.0kb downstream 11540 true Chr11: 3716405-3727944 Phaseolus vulgaris
Phvul.011G040900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3722945-3727944 Phaseolus vulgaris
Phvul.011G040900 10.0kb upstream 10.0kb upstream 16540 true Chr11: 3706405-3722944 Phaseolus vulgaris
Phvul.011G040900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3706405-3716404 Phaseolus vulgaris
Phvul.011G040900 10.0kb downstream 10.0kb downstream 16540 true Chr11: 3716405-3732944 Phaseolus vulgaris
Phvul.011G040900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3722945-3732944 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309753 5265 Fabidae View MSA
124065648 5270 Rosid View MSA
123739818 5271 Pentapetalae View MSA
122790531 5272 Eudicot View MSA
122045848 5273 Angiosperm View MSA
121343855 5274 Embryophyte View MSA
123425559 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.82756 0.0 22.1241    
cufflinks 4.33367 0.0 16.4412    
cufflinks 54.2803 0.0 179.366 High High
cufflinks 2.84677 0.0 12.4767    
cufflinks 2.84401 0.0 15.7279    
cufflinks 15.1891 0.0 50.8237   High
cufflinks 1.24591 0.0 6.42356    
cufflinks 1.30124 0.0 6.78896    
cufflinks 0.802778 0.0 5.95902   Low
cufflinks 3.17186 0.0 16.0239    
cufflinks 3.13101 0.0 16.9049    

0 Strain