Gene : Phvul.011G041900 P. vulgaris v2.1
Defline:  (1 of 2) K01527 - nascent polypeptide-associated complex subunit beta (EGD1, BTF3) Genomic Order:  435
Name:  ? Phvul.011G041900 Secondary Identifier:  ? PAC:37155773
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G041900 0.5kb upstream 0.5kb upstream 3318 true Chr11: 3825111-3828428 Phaseolus vulgaris
Phvul.011G041900 0.5kb upstream 0.5kb upstream 500 false Chr11: 3825111-3825610 Phaseolus vulgaris
Phvul.011G041900 0.5kb downstream 0.5kb downstream 3318 true Chr11: 3825611-3828928 Phaseolus vulgaris
Phvul.011G041900 0.5kb downstream 0.5kb downstream 500 false Chr11: 3828429-3828928 Phaseolus vulgaris
Phvul.011G041900 1.0kb upstream 1.0kb upstream 3818 true Chr11: 3824611-3828428 Phaseolus vulgaris
Phvul.011G041900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3824611-3825610 Phaseolus vulgaris
Phvul.011G041900 1.0kb downstream 1.0kb downstream 3818 true Chr11: 3825611-3829428 Phaseolus vulgaris
Phvul.011G041900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3828429-3829428 Phaseolus vulgaris
Phvul.011G041900 2.0kb upstream 2.0kb upstream 4818 true Chr11: 3823611-3828428 Phaseolus vulgaris
Phvul.011G041900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3823611-3825610 Phaseolus vulgaris
Phvul.011G041900 2.0kb downstream 2.0kb downstream 4818 true Chr11: 3825611-3830428 Phaseolus vulgaris
Phvul.011G041900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3828429-3830428 Phaseolus vulgaris
Phvul.011G041900 5.0kb upstream 5.0kb upstream 7818 true Chr11: 3820611-3828428 Phaseolus vulgaris
Phvul.011G041900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3820611-3825610 Phaseolus vulgaris
Phvul.011G041900 5.0kb downstream 5.0kb downstream 7818 true Chr11: 3825611-3833428 Phaseolus vulgaris
Phvul.011G041900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3828429-3833428 Phaseolus vulgaris
Phvul.011G041900 10.0kb upstream 10.0kb upstream 12818 true Chr11: 3815611-3828428 Phaseolus vulgaris
Phvul.011G041900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3815611-3825610 Phaseolus vulgaris
Phvul.011G041900 10.0kb downstream 10.0kb downstream 12818 true Chr11: 3825611-3838428 Phaseolus vulgaris
Phvul.011G041900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3828429-3838428 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312146 5265 Fabidae View MSA
124060990 5270 Rosid View MSA
123752380 5271 Pentapetalae View MSA
122793181 5272 Eudicot View MSA
122044361 5273 Angiosperm View MSA
121348079 5274 Embryophyte View MSA
123423973 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 135.747 0.0 361.239 High High
cufflinks 124.341 0.0 329.11 High  
cufflinks 80.4972 0.0 208.857 High  
cufflinks 132.381 0.0 351.214 High High
cufflinks 96.7237 0.0 251.592 High  
cufflinks 80.3095 0.0 208.396 High  
cufflinks 82.9545 0.0 215.499 High  
cufflinks 88.9615 0.0 231.65 High  
cufflinks 94.6892 0.0 247.166 High  
cufflinks 51.6721 0.0 133.84 High Low
cufflinks 111.933 0.0 293.593 High  

0 Strain