Gene : Phvul.011G031400 P. vulgaris v2.1
Defline:  (1 of 1) K17867 - diphthamide biosynthesis protein 4 (DPH4, DNAJC24) Genomic Order:  330
Name:  ? Phvul.011G031400 Secondary Identifier:  ? PAC:37156749
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G031400 0.5kb upstream 0.5kb upstream 2231 true Chr11: 2902628-2904858 Phaseolus vulgaris
Phvul.011G031400 0.5kb upstream 0.5kb upstream 500 false Chr11: 2904359-2904858 Phaseolus vulgaris
Phvul.011G031400 0.5kb downstream 0.5kb downstream 2231 true Chr11: 2902128-2904358 Phaseolus vulgaris
Phvul.011G031400 0.5kb downstream 0.5kb downstream 500 false Chr11: 2902128-2902627 Phaseolus vulgaris
Phvul.011G031400 1.0kb upstream 1.0kb upstream 2731 true Chr11: 2902628-2905358 Phaseolus vulgaris
Phvul.011G031400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2904359-2905358 Phaseolus vulgaris
Phvul.011G031400 1.0kb downstream 1.0kb downstream 2731 true Chr11: 2901628-2904358 Phaseolus vulgaris
Phvul.011G031400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2901628-2902627 Phaseolus vulgaris
Phvul.011G031400 2.0kb upstream 2.0kb upstream 3731 true Chr11: 2902628-2906358 Phaseolus vulgaris
Phvul.011G031400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2904359-2906358 Phaseolus vulgaris
Phvul.011G031400 2.0kb downstream 2.0kb downstream 3731 true Chr11: 2900628-2904358 Phaseolus vulgaris
Phvul.011G031400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2900628-2902627 Phaseolus vulgaris
Phvul.011G031400 5.0kb upstream 5.0kb upstream 6731 true Chr11: 2902628-2909358 Phaseolus vulgaris
Phvul.011G031400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2904359-2909358 Phaseolus vulgaris
Phvul.011G031400 5.0kb downstream 5.0kb downstream 6731 true Chr11: 2897628-2904358 Phaseolus vulgaris
Phvul.011G031400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2897628-2902627 Phaseolus vulgaris
Phvul.011G031400 10.0kb upstream 10.0kb upstream 11731 true Chr11: 2902628-2914358 Phaseolus vulgaris
Phvul.011G031400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2904359-2914358 Phaseolus vulgaris
Phvul.011G031400 10.0kb downstream 10.0kb downstream 11731 true Chr11: 2892628-2904358 Phaseolus vulgaris
Phvul.011G031400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2892628-2902627 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299673 5265 Fabidae View MSA
124062591 5270 Rosid View MSA
123739543 5271 Pentapetalae View MSA
122786341 5272 Eudicot View MSA
122042519 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121351608 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.93375 0.0 11.6297   High
cufflinks 1.90833 0.0 8.34025    
cufflinks 1.6664 0.0 7.4322   Low
cufflinks 2.66691 0.0 11.0079   High
cufflinks 2.44789 0.0 12.9789    
cufflinks 1.56096 0.0 6.6766   Low
cufflinks 2.19029 0.0 11.6178    
cufflinks 2.34088 0.0 9.80002    
cufflinks 1.85455 0.0 10.2261    
cufflinks 1.55323 0.0 9.73916   Low
cufflinks 2.12535 0.0 11.5301    

0 Strain