Gene : Phvul.011G035100 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Genomic Order:  367
Name:  ? Phvul.011G035100 Secondary Identifier:  ? PAC:37156355
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G035100 0.5kb upstream 0.5kb upstream 7714 true Chr11: 3232217-3239930 Phaseolus vulgaris
Phvul.011G035100 0.5kb upstream 0.5kb upstream 500 false Chr11: 3239431-3239930 Phaseolus vulgaris
Phvul.011G035100 0.5kb downstream 0.5kb downstream 7714 true Chr11: 3231717-3239430 Phaseolus vulgaris
Phvul.011G035100 0.5kb downstream 0.5kb downstream 500 false Chr11: 3231717-3232216 Phaseolus vulgaris
Phvul.011G035100 1.0kb upstream 1.0kb upstream 8214 true Chr11: 3232217-3240430 Phaseolus vulgaris
Phvul.011G035100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3239431-3240430 Phaseolus vulgaris
Phvul.011G035100 1.0kb downstream 1.0kb downstream 8214 true Chr11: 3231217-3239430 Phaseolus vulgaris
Phvul.011G035100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3231217-3232216 Phaseolus vulgaris
Phvul.011G035100 2.0kb upstream 2.0kb upstream 9214 true Chr11: 3232217-3241430 Phaseolus vulgaris
Phvul.011G035100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3239431-3241430 Phaseolus vulgaris
Phvul.011G035100 2.0kb downstream 2.0kb downstream 9214 true Chr11: 3230217-3239430 Phaseolus vulgaris
Phvul.011G035100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3230217-3232216 Phaseolus vulgaris
Phvul.011G035100 5.0kb upstream 5.0kb upstream 12214 true Chr11: 3232217-3244430 Phaseolus vulgaris
Phvul.011G035100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3239431-3244430 Phaseolus vulgaris
Phvul.011G035100 5.0kb downstream 5.0kb downstream 12214 true Chr11: 3227217-3239430 Phaseolus vulgaris
Phvul.011G035100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3227217-3232216 Phaseolus vulgaris
Phvul.011G035100 10.0kb upstream 10.0kb upstream 17214 true Chr11: 3232217-3249430 Phaseolus vulgaris
Phvul.011G035100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3239431-3249430 Phaseolus vulgaris
Phvul.011G035100 10.0kb downstream 10.0kb downstream 17214 true Chr11: 3222217-3239430 Phaseolus vulgaris
Phvul.011G035100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3222217-3232216 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299475 5265 Fabidae View MSA
124069636 5270 Rosid View MSA
123744925 5271 Pentapetalae View MSA
122791810 5272 Eudicot View MSA
122043926 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121346982 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.8179 0.0 96.1927 High  
cufflinks 35.495 0.0 92.4935 High  
cufflinks 37.3615 0.0 97.7262    
cufflinks 43.818 0.0 114.948 High  
cufflinks 39.0249 0.0 101.906 High  
cufflinks 35.5639 0.0 92.7122 High  
cufflinks 41.0645 0.0 107.823 High  
cufflinks 29.7167 0.0 77.1367 High Low
cufflinks 55.1766 0.0 147.56 High High
cufflinks 38.8804 0.0 101.676 High  
cufflinks 47.878 0.0 126.62 High High

0 Strain