Gene : Phvul.011G024000 P. vulgaris v2.1
Defline:  (1 of 66) PF14368 - Probable lipid transfer (LTP_2) Genomic Order:  259
Name:  ? Phvul.011G024000 Secondary Identifier:  ? PAC:37154676
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G024000 0.5kb upstream 0.5kb upstream 2185 true Chr11: 2144008-2146192 Phaseolus vulgaris
Phvul.011G024000 0.5kb upstream 0.5kb upstream 500 false Chr11: 2144008-2144507 Phaseolus vulgaris
Phvul.011G024000 0.5kb downstream 0.5kb downstream 2185 true Chr11: 2144508-2146692 Phaseolus vulgaris
Phvul.011G024000 0.5kb downstream 0.5kb downstream 500 false Chr11: 2146193-2146692 Phaseolus vulgaris
Phvul.011G024000 1.0kb upstream 1.0kb upstream 2685 true Chr11: 2143508-2146192 Phaseolus vulgaris
Phvul.011G024000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2143508-2144507 Phaseolus vulgaris
Phvul.011G024000 1.0kb downstream 1.0kb downstream 2685 true Chr11: 2144508-2147192 Phaseolus vulgaris
Phvul.011G024000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2146193-2147192 Phaseolus vulgaris
Phvul.011G024000 2.0kb upstream 2.0kb upstream 3685 true Chr11: 2142508-2146192 Phaseolus vulgaris
Phvul.011G024000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2142508-2144507 Phaseolus vulgaris
Phvul.011G024000 2.0kb downstream 2.0kb downstream 3685 true Chr11: 2144508-2148192 Phaseolus vulgaris
Phvul.011G024000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2146193-2148192 Phaseolus vulgaris
Phvul.011G024000 5.0kb upstream 5.0kb upstream 6685 true Chr11: 2139508-2146192 Phaseolus vulgaris
Phvul.011G024000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2139508-2144507 Phaseolus vulgaris
Phvul.011G024000 5.0kb downstream 5.0kb downstream 6685 true Chr11: 2144508-2151192 Phaseolus vulgaris
Phvul.011G024000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2146193-2151192 Phaseolus vulgaris
Phvul.011G024000 10.0kb upstream 10.0kb upstream 11685 true Chr11: 2134508-2146192 Phaseolus vulgaris
Phvul.011G024000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2134508-2144507 Phaseolus vulgaris
Phvul.011G024000 10.0kb downstream 10.0kb downstream 11685 true Chr11: 2144508-2156192 Phaseolus vulgaris
Phvul.011G024000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2146193-2156192 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311708 5265 Fabidae View MSA
124071532 5270 Rosid View MSA
123738328 5271 Pentapetalae View MSA
122795695 5272 Eudicot View MSA
122051357 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.387793 0.0 1.8209 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain