Gene : Phvul.011G026100 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10585:SF34 - ER LUMEN PROTEIN RETAINING RECEPTOR-LIKE PROTEIN Genomic Order:  280
Name:  ? Phvul.011G026100 Secondary Identifier:  ? PAC:37155986
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G026100 0.5kb upstream 0.5kb upstream 3713 true Chr11: 2311487-2315199 Phaseolus vulgaris
Phvul.011G026100 0.5kb upstream 0.5kb upstream 500 false Chr11: 2314700-2315199 Phaseolus vulgaris
Phvul.011G026100 0.5kb downstream 0.5kb downstream 3713 true Chr11: 2310987-2314699 Phaseolus vulgaris
Phvul.011G026100 0.5kb downstream 0.5kb downstream 500 false Chr11: 2310987-2311486 Phaseolus vulgaris
Phvul.011G026100 1.0kb upstream 1.0kb upstream 4213 true Chr11: 2311487-2315699 Phaseolus vulgaris
Phvul.011G026100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2314700-2315699 Phaseolus vulgaris
Phvul.011G026100 1.0kb downstream 1.0kb downstream 4213 true Chr11: 2310487-2314699 Phaseolus vulgaris
Phvul.011G026100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2310487-2311486 Phaseolus vulgaris
Phvul.011G026100 2.0kb upstream 2.0kb upstream 5213 true Chr11: 2311487-2316699 Phaseolus vulgaris
Phvul.011G026100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2314700-2316699 Phaseolus vulgaris
Phvul.011G026100 2.0kb downstream 2.0kb downstream 5213 true Chr11: 2309487-2314699 Phaseolus vulgaris
Phvul.011G026100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2309487-2311486 Phaseolus vulgaris
Phvul.011G026100 5.0kb upstream 5.0kb upstream 8213 true Chr11: 2311487-2319699 Phaseolus vulgaris
Phvul.011G026100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2314700-2319699 Phaseolus vulgaris
Phvul.011G026100 5.0kb downstream 5.0kb downstream 8213 true Chr11: 2306487-2314699 Phaseolus vulgaris
Phvul.011G026100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2306487-2311486 Phaseolus vulgaris
Phvul.011G026100 10.0kb upstream 10.0kb upstream 13213 true Chr11: 2311487-2324699 Phaseolus vulgaris
Phvul.011G026100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2314700-2324699 Phaseolus vulgaris
Phvul.011G026100 10.0kb downstream 10.0kb downstream 13213 true Chr11: 2301487-2314699 Phaseolus vulgaris
Phvul.011G026100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2301487-2311486 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309556 5265 Fabidae View MSA
124073908 5270 Rosid View MSA
123748008 5271 Pentapetalae View MSA
122789201 5272 Eudicot View MSA
122049823 5273 Angiosperm View MSA
121349491 5274 Embryophyte View MSA
123426417 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.4023 0.0 152.567 High  
cufflinks 58.21 0.0 151.979 High  
cufflinks 32.38 0.0 83.7487   Low
cufflinks 88.2489 0.0 235.814 High High
cufflinks 53.1531 0.0 138.259 High  
cufflinks 37.2089 0.0 96.1782 High Low
cufflinks 39.8451 0.0 103.016 High  
cufflinks 48.6221 0.0 126.184 High  
cufflinks 62.7014 0.0 163.814 High  
cufflinks 43.6747 0.0 113.076 High  
cufflinks 60.4823 0.0 158.092 High  

0 Strain