Gene : Phvul.011G028600 P. vulgaris v2.1
Defline:  (1 of 4) PTHR11802:SF15 - SERINE CARBOXYPEPTIDASE-LIKE 35 Genomic Order:  303
Name:  ? Phvul.011G028600 Secondary Identifier:  ? PAC:37155037
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G028600 0.5kb upstream 0.5kb upstream 3181 true Chr11: 2532390-2535570 Phaseolus vulgaris
Phvul.011G028600 0.5kb upstream 0.5kb upstream 500 false Chr11: 2535071-2535570 Phaseolus vulgaris
Phvul.011G028600 0.5kb downstream 0.5kb downstream 3181 true Chr11: 2531890-2535070 Phaseolus vulgaris
Phvul.011G028600 0.5kb downstream 0.5kb downstream 500 false Chr11: 2531890-2532389 Phaseolus vulgaris
Phvul.011G028600 1.0kb upstream 1.0kb upstream 3681 true Chr11: 2532390-2536070 Phaseolus vulgaris
Phvul.011G028600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2535071-2536070 Phaseolus vulgaris
Phvul.011G028600 1.0kb downstream 1.0kb downstream 3681 true Chr11: 2531390-2535070 Phaseolus vulgaris
Phvul.011G028600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2531390-2532389 Phaseolus vulgaris
Phvul.011G028600 2.0kb upstream 2.0kb upstream 4681 true Chr11: 2532390-2537070 Phaseolus vulgaris
Phvul.011G028600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2535071-2537070 Phaseolus vulgaris
Phvul.011G028600 2.0kb downstream 2.0kb downstream 4681 true Chr11: 2530390-2535070 Phaseolus vulgaris
Phvul.011G028600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2530390-2532389 Phaseolus vulgaris
Phvul.011G028600 5.0kb upstream 5.0kb upstream 7681 true Chr11: 2532390-2540070 Phaseolus vulgaris
Phvul.011G028600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2535071-2540070 Phaseolus vulgaris
Phvul.011G028600 5.0kb downstream 5.0kb downstream 7681 true Chr11: 2527390-2535070 Phaseolus vulgaris
Phvul.011G028600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2527390-2532389 Phaseolus vulgaris
Phvul.011G028600 10.0kb upstream 10.0kb upstream 12681 true Chr11: 2532390-2545070 Phaseolus vulgaris
Phvul.011G028600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2535071-2545070 Phaseolus vulgaris
Phvul.011G028600 10.0kb downstream 10.0kb downstream 12681 true Chr11: 2522390-2535070 Phaseolus vulgaris
Phvul.011G028600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2522390-2532389 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300003 5265 Fabidae View MSA
124064246 5270 Rosid View MSA
123744526 5271 Pentapetalae View MSA
122797546 5272 Eudicot View MSA
122047990 5273 Angiosperm View MSA
121310825 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.22534 0.0 22.4358    
cufflinks 9.1341 0.0 29.4522    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.21831 0.0 19.4434    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0744229 0.0 0.330174 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.96635 0.0 7.23008    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain