Gene : Phvul.011G028400 P. vulgaris v2.1
Defline:  (1 of 2) KOG2444 - WD40 repeat protein Genomic Order:  301
Name:  ? Phvul.011G028400 Secondary Identifier:  ? PAC:37154782
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G028400 0.5kb upstream 0.5kb upstream 5842 true Chr11: 2475519-2481360 Phaseolus vulgaris
Phvul.011G028400 0.5kb upstream 0.5kb upstream 500 false Chr11: 2475519-2476018 Phaseolus vulgaris
Phvul.011G028400 0.5kb downstream 0.5kb downstream 5842 true Chr11: 2476019-2481860 Phaseolus vulgaris
Phvul.011G028400 0.5kb downstream 0.5kb downstream 500 false Chr11: 2481361-2481860 Phaseolus vulgaris
Phvul.011G028400 1.0kb upstream 1.0kb upstream 6342 true Chr11: 2475019-2481360 Phaseolus vulgaris
Phvul.011G028400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2475019-2476018 Phaseolus vulgaris
Phvul.011G028400 1.0kb downstream 1.0kb downstream 6342 true Chr11: 2476019-2482360 Phaseolus vulgaris
Phvul.011G028400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2481361-2482360 Phaseolus vulgaris
Phvul.011G028400 2.0kb upstream 2.0kb upstream 7342 true Chr11: 2474019-2481360 Phaseolus vulgaris
Phvul.011G028400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2474019-2476018 Phaseolus vulgaris
Phvul.011G028400 2.0kb downstream 2.0kb downstream 7342 true Chr11: 2476019-2483360 Phaseolus vulgaris
Phvul.011G028400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2481361-2483360 Phaseolus vulgaris
Phvul.011G028400 5.0kb upstream 5.0kb upstream 10342 true Chr11: 2471019-2481360 Phaseolus vulgaris
Phvul.011G028400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2471019-2476018 Phaseolus vulgaris
Phvul.011G028400 5.0kb downstream 5.0kb downstream 10342 true Chr11: 2476019-2486360 Phaseolus vulgaris
Phvul.011G028400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2481361-2486360 Phaseolus vulgaris
Phvul.011G028400 10.0kb upstream 10.0kb upstream 15342 true Chr11: 2466019-2481360 Phaseolus vulgaris
Phvul.011G028400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2466019-2476018 Phaseolus vulgaris
Phvul.011G028400 10.0kb downstream 10.0kb downstream 15342 true Chr11: 2476019-2491360 Phaseolus vulgaris
Phvul.011G028400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2481361-2491360 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026331 5273 Angiosperm View MSA
122303237 5265 Fabidae View MSA
124051139 5270 Rosid View MSA
123748270 5271 Pentapetalae View MSA
122796771 5272 Eudicot View MSA
121345084 5274 Embryophyte View MSA
123424015 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.339 0.0 84.4893    
cufflinks 23.2829 0.0 89.6514    
cufflinks 16.2007 0.0 62.8979   Low
cufflinks 20.9257 0.0 85.1879    
cufflinks 22.8304 0.0 92.2996    
cufflinks 12.3257 0.0 46.1624   Low
cufflinks 27.0745 0.0 105.633    
cufflinks 24.9013 0.0 92.9074    
cufflinks 27.1174 0.0 105.792    
cufflinks 31.7463 0.0 125.743   High
cufflinks 21.9797 0.0 88.9192    

0 Strain