Gene : Phvul.011G030100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31388:SF37 - PEROXIDASE 4-RELATED Genomic Order:  317
Name:  ? Phvul.011G030100 Secondary Identifier:  ? PAC:37155219
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5466 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6824 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7214 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7445 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G030100 0.5kb upstream 0.5kb upstream 1871 true Chr11: 2726359-2728229 Phaseolus vulgaris
Phvul.011G030100 0.5kb upstream 0.5kb upstream 500 false Chr11: 2727730-2728229 Phaseolus vulgaris
Phvul.011G030100 0.5kb downstream 0.5kb downstream 1871 true Chr11: 2725859-2727729 Phaseolus vulgaris
Phvul.011G030100 0.5kb downstream 0.5kb downstream 500 false Chr11: 2725859-2726358 Phaseolus vulgaris
Phvul.011G030100 1.0kb upstream 1.0kb upstream 2371 true Chr11: 2726359-2728729 Phaseolus vulgaris
Phvul.011G030100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2727730-2728729 Phaseolus vulgaris
Phvul.011G030100 1.0kb downstream 1.0kb downstream 2371 true Chr11: 2725359-2727729 Phaseolus vulgaris
Phvul.011G030100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2725359-2726358 Phaseolus vulgaris
Phvul.011G030100 2.0kb upstream 2.0kb upstream 3371 true Chr11: 2726359-2729729 Phaseolus vulgaris
Phvul.011G030100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2727730-2729729 Phaseolus vulgaris
Phvul.011G030100 2.0kb downstream 2.0kb downstream 3371 true Chr11: 2724359-2727729 Phaseolus vulgaris
Phvul.011G030100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2724359-2726358 Phaseolus vulgaris
Phvul.011G030100 5.0kb upstream 5.0kb upstream 6371 true Chr11: 2726359-2732729 Phaseolus vulgaris
Phvul.011G030100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2727730-2732729 Phaseolus vulgaris
Phvul.011G030100 5.0kb downstream 5.0kb downstream 6371 true Chr11: 2721359-2727729 Phaseolus vulgaris
Phvul.011G030100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2721359-2726358 Phaseolus vulgaris
Phvul.011G030100 10.0kb upstream 10.0kb upstream 11371 true Chr11: 2726359-2737729 Phaseolus vulgaris
Phvul.011G030100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2727730-2737729 Phaseolus vulgaris
Phvul.011G030100 10.0kb downstream 10.0kb downstream 11371 true Chr11: 2716359-2727729 Phaseolus vulgaris
Phvul.011G030100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2716359-2726358 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307909 5265 Fabidae View MSA
124068770 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.073073 0.0 0.336347 Low  
cufflinks 0.138832 0.0 0.60092 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0475172 0.0 0.229105 Low  
cufflinks 0.328462 0.0 1.31964 Low High
cufflinks 0.273658 0.0 1.11526 Low High
cufflinks 0.0436427 0.0 0.21198 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain