Gene : Phvul.011G160900 P. vulgaris v2.1
Defline:  (1 of 1) 1.1.1.157 - 3-hydroxybutyryl-CoA dehydrogenase / BHBD Genomic Order:  1588
Name:  ? Phvul.011G160900 Secondary Identifier:  ? PAC:37156117
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G160900 0.5kb upstream 0.5kb upstream 4066 true Chr11: 45767940-45772005 Phaseolus vulgaris
Phvul.011G160900 0.5kb upstream 0.5kb upstream 500 false Chr11: 45767940-45768439 Phaseolus vulgaris
Phvul.011G160900 0.5kb downstream 0.5kb downstream 4066 true Chr11: 45768440-45772505 Phaseolus vulgaris
Phvul.011G160900 0.5kb downstream 0.5kb downstream 500 false Chr11: 45772006-45772505 Phaseolus vulgaris
Phvul.011G160900 1.0kb upstream 1.0kb upstream 4566 true Chr11: 45767440-45772005 Phaseolus vulgaris
Phvul.011G160900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 45767440-45768439 Phaseolus vulgaris
Phvul.011G160900 1.0kb downstream 1.0kb downstream 4566 true Chr11: 45768440-45773005 Phaseolus vulgaris
Phvul.011G160900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 45772006-45773005 Phaseolus vulgaris
Phvul.011G160900 2.0kb upstream 2.0kb upstream 5566 true Chr11: 45766440-45772005 Phaseolus vulgaris
Phvul.011G160900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 45766440-45768439 Phaseolus vulgaris
Phvul.011G160900 2.0kb downstream 2.0kb downstream 5566 true Chr11: 45768440-45774005 Phaseolus vulgaris
Phvul.011G160900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 45772006-45774005 Phaseolus vulgaris
Phvul.011G160900 5.0kb upstream 5.0kb upstream 8566 true Chr11: 45763440-45772005 Phaseolus vulgaris
Phvul.011G160900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 45763440-45768439 Phaseolus vulgaris
Phvul.011G160900 5.0kb downstream 5.0kb downstream 8566 true Chr11: 45768440-45777005 Phaseolus vulgaris
Phvul.011G160900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 45772006-45777005 Phaseolus vulgaris
Phvul.011G160900 10.0kb upstream 10.0kb upstream 13566 true Chr11: 45758440-45772005 Phaseolus vulgaris
Phvul.011G160900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 45758440-45768439 Phaseolus vulgaris
Phvul.011G160900 10.0kb downstream 10.0kb downstream 13566 true Chr11: 45768440-45782005 Phaseolus vulgaris
Phvul.011G160900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 45772006-45782005 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308388 5265 Fabidae View MSA
124065161 5270 Rosid View MSA
123739736 5271 Pentapetalae View MSA
122788599 5272 Eudicot View MSA
122042750 5273 Angiosperm View MSA
121344136 5274 Embryophyte View MSA
123426191 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 233.319 0.0 686.995 High High
cufflinks 25.134 0.0 65.7098    
cufflinks 15.9932 0.0 43.1667    
cufflinks 31.176 0.0 80.8657    
cufflinks 16.9788 0.0 45.7182    
cufflinks 11.5832 0.0 32.0933    
cufflinks 16.2291 0.0 43.6773    
cufflinks 16.8867 0.0 45.324    
cufflinks 38.6301 0.0 99.8747 High  
cufflinks 21.0899 0.0 55.6223    
cufflinks 19.5734 0.0 52.0097    

0 Strain