Gene : Phvul.011G152500 P. vulgaris v2.1
Defline:  (1 of 11) K03809 - NAD(P)H dehydrogenase (quinone) (wrbA) Genomic Order:  1505
Name:  ? Phvul.011G152500 Secondary Identifier:  ? PAC:37156848
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7279 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G152500 0.5kb upstream 0.5kb upstream 1819 true Chr11: 43107310-43109128 Phaseolus vulgaris
Phvul.011G152500 0.5kb upstream 0.5kb upstream 500 false Chr11: 43108629-43109128 Phaseolus vulgaris
Phvul.011G152500 0.5kb downstream 0.5kb downstream 1819 true Chr11: 43106810-43108628 Phaseolus vulgaris
Phvul.011G152500 0.5kb downstream 0.5kb downstream 500 false Chr11: 43106810-43107309 Phaseolus vulgaris
Phvul.011G152500 1.0kb upstream 1.0kb upstream 2319 true Chr11: 43107310-43109628 Phaseolus vulgaris
Phvul.011G152500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 43108629-43109628 Phaseolus vulgaris
Phvul.011G152500 1.0kb downstream 1.0kb downstream 2319 true Chr11: 43106310-43108628 Phaseolus vulgaris
Phvul.011G152500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 43106310-43107309 Phaseolus vulgaris
Phvul.011G152500 2.0kb upstream 2.0kb upstream 3319 true Chr11: 43107310-43110628 Phaseolus vulgaris
Phvul.011G152500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 43108629-43110628 Phaseolus vulgaris
Phvul.011G152500 2.0kb downstream 2.0kb downstream 3319 true Chr11: 43105310-43108628 Phaseolus vulgaris
Phvul.011G152500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 43105310-43107309 Phaseolus vulgaris
Phvul.011G152500 5.0kb upstream 5.0kb upstream 6319 true Chr11: 43107310-43113628 Phaseolus vulgaris
Phvul.011G152500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 43108629-43113628 Phaseolus vulgaris
Phvul.011G152500 5.0kb downstream 5.0kb downstream 6319 true Chr11: 43102310-43108628 Phaseolus vulgaris
Phvul.011G152500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 43102310-43107309 Phaseolus vulgaris
Phvul.011G152500 10.0kb upstream 10.0kb upstream 11319 true Chr11: 43107310-43118628 Phaseolus vulgaris
Phvul.011G152500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 43108629-43118628 Phaseolus vulgaris
Phvul.011G152500 10.0kb downstream 10.0kb downstream 11319 true Chr11: 43097310-43108628 Phaseolus vulgaris
Phvul.011G152500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 43097310-43107309 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297146 5265 Fabidae View MSA
124066507 5270 Rosid View MSA
123752194 5271 Pentapetalae View MSA
122789717 5272 Eudicot View MSA
122045410 5273 Angiosperm View MSA
121349391 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.59963 0.0 8.72856    
cufflinks 1.09641 0.0 4.01815    
cufflinks 1.89353 0.0 6.55384    
cufflinks 1.52008 0.0 5.41064    
cufflinks 1.49865 0.0 5.34108    
cufflinks 14.0284 0.0 39.0481   High
cufflinks 3.04218 0.0 10.0053    
cufflinks 0.950948 0.0 3.52161    
cufflinks 0.509793 0.0 1.98629    
cufflinks 0.103872 0.0 0.465786 Low Low
cufflinks 5.25652 0.0 16.3197    

0 Strain