Gene : Phvul.011G141300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR23042:SF67 - TRANSCRIPTION FACTOR ILR3-RELATED Genomic Order:  1399
Name:  ? Phvul.011G141300 Secondary Identifier:  ? PAC:37155574
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G141300 0.5kb upstream 0.5kb upstream 4420 true Chr11: 36080249-36084668 Phaseolus vulgaris
Phvul.011G141300 0.5kb upstream 0.5kb upstream 500 false Chr11: 36084169-36084668 Phaseolus vulgaris
Phvul.011G141300 0.5kb downstream 0.5kb downstream 4420 true Chr11: 36079749-36084168 Phaseolus vulgaris
Phvul.011G141300 0.5kb downstream 0.5kb downstream 500 false Chr11: 36079749-36080248 Phaseolus vulgaris
Phvul.011G141300 1.0kb upstream 1.0kb upstream 4920 true Chr11: 36080249-36085168 Phaseolus vulgaris
Phvul.011G141300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 36084169-36085168 Phaseolus vulgaris
Phvul.011G141300 1.0kb downstream 1.0kb downstream 4920 true Chr11: 36079249-36084168 Phaseolus vulgaris
Phvul.011G141300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 36079249-36080248 Phaseolus vulgaris
Phvul.011G141300 2.0kb upstream 2.0kb upstream 5920 true Chr11: 36080249-36086168 Phaseolus vulgaris
Phvul.011G141300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 36084169-36086168 Phaseolus vulgaris
Phvul.011G141300 2.0kb downstream 2.0kb downstream 5920 true Chr11: 36078249-36084168 Phaseolus vulgaris
Phvul.011G141300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 36078249-36080248 Phaseolus vulgaris
Phvul.011G141300 5.0kb upstream 5.0kb upstream 8920 true Chr11: 36080249-36089168 Phaseolus vulgaris
Phvul.011G141300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 36084169-36089168 Phaseolus vulgaris
Phvul.011G141300 5.0kb downstream 5.0kb downstream 8920 true Chr11: 36075249-36084168 Phaseolus vulgaris
Phvul.011G141300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 36075249-36080248 Phaseolus vulgaris
Phvul.011G141300 10.0kb upstream 10.0kb upstream 13920 true Chr11: 36080249-36094168 Phaseolus vulgaris
Phvul.011G141300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 36084169-36094168 Phaseolus vulgaris
Phvul.011G141300 10.0kb downstream 10.0kb downstream 13920 true Chr11: 36070249-36084168 Phaseolus vulgaris
Phvul.011G141300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 36070249-36080248 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309808 5265 Fabidae View MSA
124066485 5270 Rosid View MSA
123741763 5271 Pentapetalae View MSA
122797303 5272 Eudicot View MSA
122049965 5273 Angiosperm View MSA
121349797 5274 Embryophyte View MSA
123427389 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.091 0.0 147.133 High High
cufflinks 38.7602 0.0 100.294 High  
cufflinks 23.0047 0.0 59.8062   Low
cufflinks 36.9111 0.0 95.4625 High  
cufflinks 31.6285 0.0 81.7572    
cufflinks 26.5928 0.0 68.8866   Low
cufflinks 34.1255 0.0 88.2147 High  
cufflinks 39.4815 0.0 102.222 High  
cufflinks 33.7797 0.0 87.3156 High  
cufflinks 51.6419 0.0 134.668 High High
cufflinks 33.6987 0.0 87.1051    

0 Strain