Gene : Phvul.011G111300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10632 - SULFIDE:QUINONE OXIDOREDUCTASE Genomic Order:  1117
Name:  ? Phvul.011G111300 Secondary Identifier:  ? PAC:37156080
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7279 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G111300 0.5kb upstream 0.5kb upstream 9446 true Chr11: 14462144-14471589 Phaseolus vulgaris
Phvul.011G111300 0.5kb upstream 0.5kb upstream 500 false Chr11: 14471090-14471589 Phaseolus vulgaris
Phvul.011G111300 0.5kb downstream 0.5kb downstream 9446 true Chr11: 14461644-14471089 Phaseolus vulgaris
Phvul.011G111300 0.5kb downstream 0.5kb downstream 500 false Chr11: 14461644-14462143 Phaseolus vulgaris
Phvul.011G111300 1.0kb upstream 1.0kb upstream 9946 true Chr11: 14462144-14472089 Phaseolus vulgaris
Phvul.011G111300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 14471090-14472089 Phaseolus vulgaris
Phvul.011G111300 1.0kb downstream 1.0kb downstream 9946 true Chr11: 14461144-14471089 Phaseolus vulgaris
Phvul.011G111300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 14461144-14462143 Phaseolus vulgaris
Phvul.011G111300 2.0kb upstream 2.0kb upstream 10946 true Chr11: 14462144-14473089 Phaseolus vulgaris
Phvul.011G111300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 14471090-14473089 Phaseolus vulgaris
Phvul.011G111300 2.0kb downstream 2.0kb downstream 10946 true Chr11: 14460144-14471089 Phaseolus vulgaris
Phvul.011G111300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 14460144-14462143 Phaseolus vulgaris
Phvul.011G111300 5.0kb upstream 5.0kb upstream 13946 true Chr11: 14462144-14476089 Phaseolus vulgaris
Phvul.011G111300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 14471090-14476089 Phaseolus vulgaris
Phvul.011G111300 5.0kb downstream 5.0kb downstream 13946 true Chr11: 14457144-14471089 Phaseolus vulgaris
Phvul.011G111300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 14457144-14462143 Phaseolus vulgaris
Phvul.011G111300 10.0kb upstream 10.0kb upstream 18946 true Chr11: 14462144-14481089 Phaseolus vulgaris
Phvul.011G111300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 14471090-14481089 Phaseolus vulgaris
Phvul.011G111300 10.0kb downstream 10.0kb downstream 18946 true Chr11: 14452144-14471089 Phaseolus vulgaris
Phvul.011G111300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 14452144-14462143 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306603 5265 Fabidae View MSA
124065311 5270 Rosid View MSA
123739176 5271 Pentapetalae View MSA
122786573 5272 Eudicot View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0604 0.0 31.5485    
cufflinks 23.1108 0.0 59.7967   High
cufflinks 18.0627 0.0 46.7014    
cufflinks 13.401 0.0 35.0222    
cufflinks 13.0291 0.0 34.0643    
cufflinks 14.6446 0.0 38.0024    
cufflinks 5.647 0.0 15.6222   Low
cufflinks 4.04841 0.0 11.5025   Low
cufflinks 9.07087 0.0 24.1538    
cufflinks 9.67964 0.0 25.6552    
cufflinks 14.8323 0.0 38.5415    

0 Strain