Gene : Phvul.011G113000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31901:SF10 - AUXIN-RESPONSIVE GH3 FAMILY PROTEIN Genomic Order:  1137
Name:  ? Phvul.011G113000 Secondary Identifier:  ? PAC:37157233
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G113000 0.5kb upstream 0.5kb upstream 4502 true Chr11: 14964064-14968565 Phaseolus vulgaris
Phvul.011G113000 0.5kb upstream 0.5kb upstream 500 false Chr11: 14964064-14964563 Phaseolus vulgaris
Phvul.011G113000 0.5kb downstream 0.5kb downstream 4502 true Chr11: 14964564-14969065 Phaseolus vulgaris
Phvul.011G113000 0.5kb downstream 0.5kb downstream 500 false Chr11: 14968566-14969065 Phaseolus vulgaris
Phvul.011G113000 1.0kb upstream 1.0kb upstream 5002 true Chr11: 14963564-14968565 Phaseolus vulgaris
Phvul.011G113000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 14963564-14964563 Phaseolus vulgaris
Phvul.011G113000 1.0kb downstream 1.0kb downstream 5002 true Chr11: 14964564-14969565 Phaseolus vulgaris
Phvul.011G113000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 14968566-14969565 Phaseolus vulgaris
Phvul.011G113000 2.0kb upstream 2.0kb upstream 6002 true Chr11: 14962564-14968565 Phaseolus vulgaris
Phvul.011G113000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 14962564-14964563 Phaseolus vulgaris
Phvul.011G113000 2.0kb downstream 2.0kb downstream 6002 true Chr11: 14964564-14970565 Phaseolus vulgaris
Phvul.011G113000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 14968566-14970565 Phaseolus vulgaris
Phvul.011G113000 5.0kb upstream 5.0kb upstream 9002 true Chr11: 14959564-14968565 Phaseolus vulgaris
Phvul.011G113000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 14959564-14964563 Phaseolus vulgaris
Phvul.011G113000 5.0kb downstream 5.0kb downstream 9002 true Chr11: 14964564-14973565 Phaseolus vulgaris
Phvul.011G113000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 14968566-14973565 Phaseolus vulgaris
Phvul.011G113000 10.0kb upstream 10.0kb upstream 14002 true Chr11: 14954564-14968565 Phaseolus vulgaris
Phvul.011G113000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 14954564-14964563 Phaseolus vulgaris
Phvul.011G113000 10.0kb downstream 10.0kb downstream 14002 true Chr11: 14964564-14978565 Phaseolus vulgaris
Phvul.011G113000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 14968566-14978565 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301063 5265 Fabidae View MSA
124061485 5270 Rosid View MSA
123750974 5271 Pentapetalae View MSA
122788178 5272 Eudicot View MSA
122044155 5273 Angiosperm View MSA
121349637 5274 Embryophyte View MSA
123381383 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.46921 0.0 4.67904    
cufflinks 3.9966 0.0 11.3809    
cufflinks 7.43568 0.0 20.011    
cufflinks 0.920229 0.0 3.11066    
cufflinks 1.45401 0.0 4.67015    
cufflinks 12.1304 0.0 31.6528   High
cufflinks 0.0150847 0.0 0.0738774 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0165145 0.0 0.0802136 Low Low
cufflinks 0.372949 0.0 1.37592    
cufflinks 4.8957 0.0 13.7354    

0 Strain