Gene : Phvul.011G118900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31451:SF1 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED Genomic Order:  1189
Name:  ? Phvul.011G118900 Secondary Identifier:  ? PAC:37154892
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G118900 0.5kb upstream 0.5kb upstream 5210 true Chr11: 18907268-18912477 Phaseolus vulgaris
Phvul.011G118900 0.5kb upstream 0.5kb upstream 500 false Chr11: 18907268-18907767 Phaseolus vulgaris
Phvul.011G118900 0.5kb downstream 0.5kb downstream 5210 true Chr11: 18907768-18912977 Phaseolus vulgaris
Phvul.011G118900 0.5kb downstream 0.5kb downstream 500 false Chr11: 18912478-18912977 Phaseolus vulgaris
Phvul.011G118900 1.0kb upstream 1.0kb upstream 5710 true Chr11: 18906768-18912477 Phaseolus vulgaris
Phvul.011G118900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 18906768-18907767 Phaseolus vulgaris
Phvul.011G118900 1.0kb downstream 1.0kb downstream 5710 true Chr11: 18907768-18913477 Phaseolus vulgaris
Phvul.011G118900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 18912478-18913477 Phaseolus vulgaris
Phvul.011G118900 2.0kb upstream 2.0kb upstream 6710 true Chr11: 18905768-18912477 Phaseolus vulgaris
Phvul.011G118900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 18905768-18907767 Phaseolus vulgaris
Phvul.011G118900 2.0kb downstream 2.0kb downstream 6710 true Chr11: 18907768-18914477 Phaseolus vulgaris
Phvul.011G118900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 18912478-18914477 Phaseolus vulgaris
Phvul.011G118900 5.0kb upstream 5.0kb upstream 9710 true Chr11: 18902768-18912477 Phaseolus vulgaris
Phvul.011G118900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 18902768-18907767 Phaseolus vulgaris
Phvul.011G118900 5.0kb downstream 5.0kb downstream 9710 true Chr11: 18907768-18917477 Phaseolus vulgaris
Phvul.011G118900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 18912478-18917477 Phaseolus vulgaris
Phvul.011G118900 10.0kb upstream 10.0kb upstream 14710 true Chr11: 18897768-18912477 Phaseolus vulgaris
Phvul.011G118900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 18897768-18907767 Phaseolus vulgaris
Phvul.011G118900 10.0kb downstream 10.0kb downstream 14710 true Chr11: 18907768-18922477 Phaseolus vulgaris
Phvul.011G118900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 18912478-18922477 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314019 5265 Fabidae View MSA
124068512 5270 Rosid View MSA
123745616 5271 Pentapetalae View MSA
122797757 5272 Eudicot View MSA
122048761 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.17408 0.0 17.1678   Low
cufflinks 18.5038 0.0 47.9517    
cufflinks 8.67933 0.0 23.4197   Low
cufflinks 16.0796 0.0 41.9934    
cufflinks 27.3252 0.0 70.6558    
cufflinks 15.7578 0.0 41.0167    
cufflinks 20.8417 0.0 53.9044    
cufflinks 15.0759 0.0 39.2319    
cufflinks 17.7129 0.0 45.9777    
cufflinks 9.01254 0.0 24.3091   Low
cufflinks 48.5587 0.0 128.191 High High

0 Strain