Gene : Phvul.011G117700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12736//PTHR12736:SF13 - LANC-LIKE PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1162
Name:  ? Phvul.011G117700 Secondary Identifier:  ? PAC:37156966
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G117700 0.5kb upstream 0.5kb upstream 3501 true Chr11: 17124046-17127546 Phaseolus vulgaris
Phvul.011G117700 0.5kb upstream 0.5kb upstream 500 false Chr11: 17127047-17127546 Phaseolus vulgaris
Phvul.011G117700 0.5kb downstream 0.5kb downstream 3501 true Chr11: 17123546-17127046 Phaseolus vulgaris
Phvul.011G117700 0.5kb downstream 0.5kb downstream 500 false Chr11: 17123546-17124045 Phaseolus vulgaris
Phvul.011G117700 1.0kb upstream 1.0kb upstream 4001 true Chr11: 17124046-17128046 Phaseolus vulgaris
Phvul.011G117700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 17127047-17128046 Phaseolus vulgaris
Phvul.011G117700 1.0kb downstream 1.0kb downstream 4001 true Chr11: 17123046-17127046 Phaseolus vulgaris
Phvul.011G117700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 17123046-17124045 Phaseolus vulgaris
Phvul.011G117700 2.0kb upstream 2.0kb upstream 5001 true Chr11: 17124046-17129046 Phaseolus vulgaris
Phvul.011G117700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 17127047-17129046 Phaseolus vulgaris
Phvul.011G117700 2.0kb downstream 2.0kb downstream 5001 true Chr11: 17122046-17127046 Phaseolus vulgaris
Phvul.011G117700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 17122046-17124045 Phaseolus vulgaris
Phvul.011G117700 5.0kb upstream 5.0kb upstream 8001 true Chr11: 17124046-17132046 Phaseolus vulgaris
Phvul.011G117700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 17127047-17132046 Phaseolus vulgaris
Phvul.011G117700 5.0kb downstream 5.0kb downstream 8001 true Chr11: 17119046-17127046 Phaseolus vulgaris
Phvul.011G117700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 17119046-17124045 Phaseolus vulgaris
Phvul.011G117700 10.0kb upstream 10.0kb upstream 13001 true Chr11: 17124046-17137046 Phaseolus vulgaris
Phvul.011G117700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 17127047-17137046 Phaseolus vulgaris
Phvul.011G117700 10.0kb downstream 10.0kb downstream 13001 true Chr11: 17114046-17127046 Phaseolus vulgaris
Phvul.011G117700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 17114046-17124045 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305400 5265 Fabidae View MSA
124065113 5270 Rosid View MSA
123737530 5271 Pentapetalae View MSA
122788012 5272 Eudicot View MSA
122042680 5273 Angiosperm View MSA
121348546 5274 Embryophyte View MSA
123425935 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.69264 0.0 18.4555   Low
cufflinks 10.2354 0.0 27.3061    
cufflinks 13.0288 0.0 34.2424    
cufflinks 14.8954 0.0 38.9395    
cufflinks 9.6189 0.0 25.8319    
cufflinks 13.9121 0.0 36.4073    
cufflinks 13.1278 0.0 34.3872    
cufflinks 15.3091 0.0 39.857    
cufflinks 13.4515 0.0 35.2746    
cufflinks 19.808 0.0 51.2716   High
cufflinks 7.68423 0.0 20.983   Low

0 Strain