Gene : Phvul.011G118400 P. vulgaris v2.1
Defline:  (1 of 4) PTHR10992//PTHR10992:SF869 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1195
Name:  ? Phvul.011G118400 Secondary Identifier:  ? PAC:37156676
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G118400 0.5kb upstream 0.5kb upstream 3020 true Chr11: 19116360-19119379 Phaseolus vulgaris
Phvul.011G118400 0.5kb upstream 0.5kb upstream 500 false Chr11: 19116360-19116859 Phaseolus vulgaris
Phvul.011G118400 0.5kb downstream 0.5kb downstream 3020 true Chr11: 19116860-19119879 Phaseolus vulgaris
Phvul.011G118400 0.5kb downstream 0.5kb downstream 500 false Chr11: 19119380-19119879 Phaseolus vulgaris
Phvul.011G118400 1.0kb upstream 1.0kb upstream 3520 true Chr11: 19115860-19119379 Phaseolus vulgaris
Phvul.011G118400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 19115860-19116859 Phaseolus vulgaris
Phvul.011G118400 1.0kb downstream 1.0kb downstream 3520 true Chr11: 19116860-19120379 Phaseolus vulgaris
Phvul.011G118400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 19119380-19120379 Phaseolus vulgaris
Phvul.011G118400 2.0kb upstream 2.0kb upstream 4520 true Chr11: 19114860-19119379 Phaseolus vulgaris
Phvul.011G118400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 19114860-19116859 Phaseolus vulgaris
Phvul.011G118400 2.0kb downstream 2.0kb downstream 4520 true Chr11: 19116860-19121379 Phaseolus vulgaris
Phvul.011G118400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 19119380-19121379 Phaseolus vulgaris
Phvul.011G118400 5.0kb upstream 5.0kb upstream 7520 true Chr11: 19111860-19119379 Phaseolus vulgaris
Phvul.011G118400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 19111860-19116859 Phaseolus vulgaris
Phvul.011G118400 5.0kb downstream 5.0kb downstream 7520 true Chr11: 19116860-19124379 Phaseolus vulgaris
Phvul.011G118400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 19119380-19124379 Phaseolus vulgaris
Phvul.011G118400 10.0kb upstream 10.0kb upstream 12520 true Chr11: 19106860-19119379 Phaseolus vulgaris
Phvul.011G118400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 19106860-19116859 Phaseolus vulgaris
Phvul.011G118400 10.0kb downstream 10.0kb downstream 12520 true Chr11: 19116860-19129379 Phaseolus vulgaris
Phvul.011G118400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 19119380-19129379 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310713 5265 Fabidae View MSA
124069976 5270 Rosid View MSA
123753681 5271 Pentapetalae View MSA
122797567 5272 Eudicot View MSA
122048317 5273 Angiosperm View MSA
121350618 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.9316 0.0 59.8381    
cufflinks 40.2025 0.0 103.975 High  
cufflinks 17.0654 0.0 45.2236    
cufflinks 71.737 0.0 188.817 High High
cufflinks 22.5886 0.0 59.1314    
cufflinks 20.4276 0.0 53.5666    
cufflinks 7.79761 0.0 22.1   Low
cufflinks 6.21486 0.0 17.9733   Low
cufflinks 9.34414 0.0 26.1137   Low
cufflinks 33.5738 0.0 86.8149    
cufflinks 22.4719 0.0 58.7956    

0 Strain