Gene : Phvul.011G103000 P. vulgaris v2.1
Defline:  (1 of 2) 3.4.24.85 - S2P endopeptidase / Sterol-regulatory element-binding proteins intramembrane protease Genomic Order:  1036
Name:  ? Phvul.011G103000 Secondary Identifier:  ? PAC:37154872
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G103000 0.5kb upstream 0.5kb upstream 5254 true Chr11: 11476637-11481890 Phaseolus vulgaris
Phvul.011G103000 0.5kb upstream 0.5kb upstream 500 false Chr11: 11476637-11477136 Phaseolus vulgaris
Phvul.011G103000 0.5kb downstream 0.5kb downstream 5254 true Chr11: 11477137-11482390 Phaseolus vulgaris
Phvul.011G103000 0.5kb downstream 0.5kb downstream 500 false Chr11: 11481891-11482390 Phaseolus vulgaris
Phvul.011G103000 1.0kb upstream 1.0kb upstream 5754 true Chr11: 11476137-11481890 Phaseolus vulgaris
Phvul.011G103000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11476137-11477136 Phaseolus vulgaris
Phvul.011G103000 1.0kb downstream 1.0kb downstream 5754 true Chr11: 11477137-11482890 Phaseolus vulgaris
Phvul.011G103000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11481891-11482890 Phaseolus vulgaris
Phvul.011G103000 2.0kb upstream 2.0kb upstream 6754 true Chr11: 11475137-11481890 Phaseolus vulgaris
Phvul.011G103000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11475137-11477136 Phaseolus vulgaris
Phvul.011G103000 2.0kb downstream 2.0kb downstream 6754 true Chr11: 11477137-11483890 Phaseolus vulgaris
Phvul.011G103000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11481891-11483890 Phaseolus vulgaris
Phvul.011G103000 5.0kb upstream 5.0kb upstream 9754 true Chr11: 11472137-11481890 Phaseolus vulgaris
Phvul.011G103000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11472137-11477136 Phaseolus vulgaris
Phvul.011G103000 5.0kb downstream 5.0kb downstream 9754 true Chr11: 11477137-11486890 Phaseolus vulgaris
Phvul.011G103000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11481891-11486890 Phaseolus vulgaris
Phvul.011G103000 10.0kb upstream 10.0kb upstream 14754 true Chr11: 11467137-11481890 Phaseolus vulgaris
Phvul.011G103000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11467137-11477136 Phaseolus vulgaris
Phvul.011G103000 10.0kb downstream 10.0kb downstream 14754 true Chr11: 11477137-11491890 Phaseolus vulgaris
Phvul.011G103000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11481891-11491890 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301183 5265 Fabidae View MSA
124063019 5270 Rosid View MSA
123739273 5271 Pentapetalae View MSA
122788607 5272 Eudicot View MSA
122044779 5273 Angiosperm View MSA
121347975 5274 Embryophyte View MSA
123424345 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.1385 0.0 80.6346    
cufflinks 14.5019 0.0 38.114    
cufflinks 55.8924 0.0 148.734 High High
cufflinks 15.5791 0.0 40.9884    
cufflinks 11.5532 0.0 30.8306    
cufflinks 25.9991 0.0 67.2028    
cufflinks 2.99114 0.0 9.10729   Low
cufflinks 3.66631 0.0 10.8492   Low
cufflinks 4.16028 0.0 12.2855   Low
cufflinks 18.0849 0.0 47.0579    
cufflinks 10.1924 0.0 27.517    

0 Strain