Gene : Phvul.011G104000 P. vulgaris v2.1
Genomic Order:  1046 Name:  ? Phvul.011G104000
Secondary Identifier:  ? PAC:37154985
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G104000 0.5kb upstream 0.5kb upstream 917 true Chr11: 11706516-11707432 Phaseolus vulgaris
Phvul.011G104000 0.5kb upstream 0.5kb upstream 500 false Chr11: 11706933-11707432 Phaseolus vulgaris
Phvul.011G104000 0.5kb downstream 0.5kb downstream 917 true Chr11: 11706016-11706932 Phaseolus vulgaris
Phvul.011G104000 0.5kb downstream 0.5kb downstream 500 false Chr11: 11706016-11706515 Phaseolus vulgaris
Phvul.011G104000 1.0kb upstream 1.0kb upstream 1417 true Chr11: 11706516-11707932 Phaseolus vulgaris
Phvul.011G104000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11706933-11707932 Phaseolus vulgaris
Phvul.011G104000 1.0kb downstream 1.0kb downstream 1417 true Chr11: 11705516-11706932 Phaseolus vulgaris
Phvul.011G104000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11705516-11706515 Phaseolus vulgaris
Phvul.011G104000 2.0kb upstream 2.0kb upstream 2417 true Chr11: 11706516-11708932 Phaseolus vulgaris
Phvul.011G104000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11706933-11708932 Phaseolus vulgaris
Phvul.011G104000 2.0kb downstream 2.0kb downstream 2417 true Chr11: 11704516-11706932 Phaseolus vulgaris
Phvul.011G104000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11704516-11706515 Phaseolus vulgaris
Phvul.011G104000 5.0kb upstream 5.0kb upstream 5417 true Chr11: 11706516-11711932 Phaseolus vulgaris
Phvul.011G104000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11706933-11711932 Phaseolus vulgaris
Phvul.011G104000 5.0kb downstream 5.0kb downstream 5417 true Chr11: 11701516-11706932 Phaseolus vulgaris
Phvul.011G104000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11701516-11706515 Phaseolus vulgaris
Phvul.011G104000 10.0kb upstream 10.0kb upstream 10417 true Chr11: 11706516-11716932 Phaseolus vulgaris
Phvul.011G104000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11706933-11716932 Phaseolus vulgaris
Phvul.011G104000 10.0kb downstream 10.0kb downstream 10417 true Chr11: 11696516-11706932 Phaseolus vulgaris
Phvul.011G104000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11696516-11706515 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314647 5265 Fabidae View MSA
124050550 5270 Rosid View MSA
123744697 5271 Pentapetalae View MSA
122796556 5272 Eudicot View MSA
122051033 5273 Angiosperm View MSA
121312256 5274 Embryophyte View MSA
123349446 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.57896 0.0 13.1576    
cufflinks 0.454466 0.0 1.96711 Low  
cufflinks 0.207727 0.0 0.97023 Low Low
cufflinks 0.951007 0.0 3.88094    
cufflinks 2.28122 0.0 8.735    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.06412 0.0 11.3165    
cufflinks 0.288214 0.0 1.29809 Low  
cufflinks 6.72729 0.0 22.9371   High
cufflinks 0.135428 0.0 0.668476 Low Low
cufflinks 2.75908 0.0 10.3291    

0 Strain