Gene : Phvul.011G094700 P. vulgaris v2.1
Defline:  (1 of 3) K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) Genomic Order:  949
Name:  ? Phvul.011G094700 Secondary Identifier:  ? PAC:37154834
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G094700 0.5kb upstream 0.5kb upstream 6154 true Chr11: 9556616-9562769 Phaseolus vulgaris
Phvul.011G094700 0.5kb upstream 0.5kb upstream 500 false Chr11: 9562270-9562769 Phaseolus vulgaris
Phvul.011G094700 0.5kb downstream 0.5kb downstream 6154 true Chr11: 9556116-9562269 Phaseolus vulgaris
Phvul.011G094700 0.5kb downstream 0.5kb downstream 500 false Chr11: 9556116-9556615 Phaseolus vulgaris
Phvul.011G094700 1.0kb upstream 1.0kb upstream 6654 true Chr11: 9556616-9563269 Phaseolus vulgaris
Phvul.011G094700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9562270-9563269 Phaseolus vulgaris
Phvul.011G094700 1.0kb downstream 1.0kb downstream 6654 true Chr11: 9555616-9562269 Phaseolus vulgaris
Phvul.011G094700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9555616-9556615 Phaseolus vulgaris
Phvul.011G094700 2.0kb upstream 2.0kb upstream 7654 true Chr11: 9556616-9564269 Phaseolus vulgaris
Phvul.011G094700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9562270-9564269 Phaseolus vulgaris
Phvul.011G094700 2.0kb downstream 2.0kb downstream 7654 true Chr11: 9554616-9562269 Phaseolus vulgaris
Phvul.011G094700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9554616-9556615 Phaseolus vulgaris
Phvul.011G094700 5.0kb upstream 5.0kb upstream 10654 true Chr11: 9556616-9567269 Phaseolus vulgaris
Phvul.011G094700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9562270-9567269 Phaseolus vulgaris
Phvul.011G094700 5.0kb downstream 5.0kb downstream 10654 true Chr11: 9551616-9562269 Phaseolus vulgaris
Phvul.011G094700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9551616-9556615 Phaseolus vulgaris
Phvul.011G094700 10.0kb upstream 10.0kb upstream 15654 true Chr11: 9556616-9572269 Phaseolus vulgaris
Phvul.011G094700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9562270-9572269 Phaseolus vulgaris
Phvul.011G094700 10.0kb downstream 10.0kb downstream 15654 true Chr11: 9546616-9562269 Phaseolus vulgaris
Phvul.011G094700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9546616-9556615 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305627 5265 Fabidae View MSA
124067742 5270 Rosid View MSA
123740727 5271 Pentapetalae View MSA
122786364 5272 Eudicot View MSA
122049211 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121344255 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.5935 0.0 43.3323    
cufflinks 17.2797 0.0 54.9609    
cufflinks 25.2787 0.0 82.1927   High
cufflinks 9.01694 0.0 30.0304   Low
cufflinks 18.1044 0.0 57.5527    
cufflinks 17.6482 0.0 56.1874    
cufflinks 23.359 0.0 75.8453    
cufflinks 22.9132 0.0 74.2061    
cufflinks 22.7471 0.0 73.5228    
cufflinks 19.7115 0.0 64.3601    
cufflinks 17.9152 0.0 57.0524    

0 Strain