Gene : Phvul.011G097700 P. vulgaris v2.1
Defline:  (1 of 3) K06620 - transcription factor E2F3 (E2F3) Genomic Order:  981
Name:  ? Phvul.011G097700 Secondary Identifier:  ? PAC:37154967
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G097700 0.5kb upstream 0.5kb upstream 6329 true Chr11: 10026780-10033108 Phaseolus vulgaris
Phvul.011G097700 0.5kb upstream 0.5kb upstream 500 false Chr11: 10032609-10033108 Phaseolus vulgaris
Phvul.011G097700 0.5kb downstream 0.5kb downstream 6329 true Chr11: 10026280-10032608 Phaseolus vulgaris
Phvul.011G097700 0.5kb downstream 0.5kb downstream 500 false Chr11: 10026280-10026779 Phaseolus vulgaris
Phvul.011G097700 1.0kb upstream 1.0kb upstream 6829 true Chr11: 10026780-10033608 Phaseolus vulgaris
Phvul.011G097700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10032609-10033608 Phaseolus vulgaris
Phvul.011G097700 1.0kb downstream 1.0kb downstream 6829 true Chr11: 10025780-10032608 Phaseolus vulgaris
Phvul.011G097700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10025780-10026779 Phaseolus vulgaris
Phvul.011G097700 2.0kb upstream 2.0kb upstream 7829 true Chr11: 10026780-10034608 Phaseolus vulgaris
Phvul.011G097700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10032609-10034608 Phaseolus vulgaris
Phvul.011G097700 2.0kb downstream 2.0kb downstream 7829 true Chr11: 10024780-10032608 Phaseolus vulgaris
Phvul.011G097700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10024780-10026779 Phaseolus vulgaris
Phvul.011G097700 5.0kb upstream 5.0kb upstream 10829 true Chr11: 10026780-10037608 Phaseolus vulgaris
Phvul.011G097700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10032609-10037608 Phaseolus vulgaris
Phvul.011G097700 5.0kb downstream 5.0kb downstream 10829 true Chr11: 10021780-10032608 Phaseolus vulgaris
Phvul.011G097700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10021780-10026779 Phaseolus vulgaris
Phvul.011G097700 10.0kb upstream 10.0kb upstream 15829 true Chr11: 10026780-10042608 Phaseolus vulgaris
Phvul.011G097700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10032609-10042608 Phaseolus vulgaris
Phvul.011G097700 10.0kb downstream 10.0kb downstream 15829 true Chr11: 10016780-10032608 Phaseolus vulgaris
Phvul.011G097700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10016780-10026779 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304266 5265 Fabidae View MSA
124067172 5270 Rosid View MSA
123739560 5271 Pentapetalae View MSA
122789212 5272 Eudicot View MSA
122042305 5273 Angiosperm View MSA
121345510 5274 Embryophyte View MSA
123428750 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.99424 0.0 21.6321    
cufflinks 10.6317 0.0 28.2442    
cufflinks 7.19916 0.0 19.6873   Low
cufflinks 6.14944 0.0 17.085   Low
cufflinks 10.5485 0.0 28.0885    
cufflinks 7.3365 0.0 20.041    
cufflinks 11.735 0.0 30.8836    
cufflinks 7.55396 0.0 20.5556    
cufflinks 12.0099 0.0 31.6027   High
cufflinks 11.2987 0.0 29.8939    
cufflinks 11.8486 0.0 31.2906   High

0 Strain