Gene : Phvul.011G214800 P. vulgaris v2.1
Defline:  (1 of 2) K12831 - splicing factor 3B subunit 4 (SF3B4, SAP49) Genomic Order:  2142
Name:  ? Phvul.011G214800 Secondary Identifier:  ? PAC:37155532
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G214800 0.5kb upstream 0.5kb upstream 5780 true Chr11: 53426417-53432196 Phaseolus vulgaris
Phvul.011G214800 0.5kb upstream 0.5kb upstream 500 false Chr11: 53426417-53426916 Phaseolus vulgaris
Phvul.011G214800 0.5kb downstream 0.5kb downstream 5780 true Chr11: 53426917-53432696 Phaseolus vulgaris
Phvul.011G214800 0.5kb downstream 0.5kb downstream 500 false Chr11: 53432197-53432696 Phaseolus vulgaris
Phvul.011G214800 1.0kb upstream 1.0kb upstream 6280 true Chr11: 53425917-53432196 Phaseolus vulgaris
Phvul.011G214800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 53425917-53426916 Phaseolus vulgaris
Phvul.011G214800 1.0kb downstream 1.0kb downstream 6280 true Chr11: 53426917-53433196 Phaseolus vulgaris
Phvul.011G214800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 53432197-53433196 Phaseolus vulgaris
Phvul.011G214800 2.0kb upstream 2.0kb upstream 7280 true Chr11: 53424917-53432196 Phaseolus vulgaris
Phvul.011G214800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 53424917-53426916 Phaseolus vulgaris
Phvul.011G214800 2.0kb downstream 2.0kb downstream 7280 true Chr11: 53426917-53434196 Phaseolus vulgaris
Phvul.011G214800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 53432197-53434196 Phaseolus vulgaris
Phvul.011G214800 5.0kb upstream 5.0kb upstream 10280 true Chr11: 53421917-53432196 Phaseolus vulgaris
Phvul.011G214800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 53421917-53426916 Phaseolus vulgaris
Phvul.011G214800 5.0kb downstream 5.0kb downstream 10280 true Chr11: 53426917-53437196 Phaseolus vulgaris
Phvul.011G214800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 53432197-53437196 Phaseolus vulgaris
Phvul.011G214800 10.0kb upstream 10.0kb upstream 15280 true Chr11: 53416917-53432196 Phaseolus vulgaris
Phvul.011G214800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 53416917-53426916 Phaseolus vulgaris
Phvul.011G214800 10.0kb downstream 10.0kb downstream 15280 true Chr11: 53426917-53442196 Phaseolus vulgaris
Phvul.011G214800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 53432197-53442196 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302196 5265 Fabidae View MSA
124063998 5270 Rosid View MSA
123752165 5271 Pentapetalae View MSA
122797321 5272 Eudicot View MSA
122051122 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349008 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.8853 0.0 61.915    
cufflinks 37.7706 0.0 97.8257 High High
cufflinks 18.7054 0.0 48.8529   Low
cufflinks 30.7718 0.0 79.5488    
cufflinks 36.9349 0.0 95.7058 High  
cufflinks 23.1208 0.0 59.9717    
cufflinks 23.0351 0.0 59.6825    
cufflinks 25.2481 0.0 65.3402    
cufflinks 29.3616 0.0 75.8941    
cufflinks 40.6822 0.0 105.534 High High
cufflinks 37.4804 0.0 97.0749 High High

0 Strain