Gene : Phvul.011G200000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21320:SF0 - METHYLTRANSFERASE-LIKE PROTEIN 17, MITOCHONDRIAL Genomic Order:  1991
Name:  ? Phvul.011G200000 Secondary Identifier:  ? PAC:37155709
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G200000 0.5kb upstream 0.5kb upstream 7678 true Chr11: 51499192-51506869 Phaseolus vulgaris
Phvul.011G200000 0.5kb upstream 0.5kb upstream 500 false Chr11: 51506370-51506869 Phaseolus vulgaris
Phvul.011G200000 0.5kb downstream 0.5kb downstream 7678 true Chr11: 51498692-51506369 Phaseolus vulgaris
Phvul.011G200000 0.5kb downstream 0.5kb downstream 500 false Chr11: 51498692-51499191 Phaseolus vulgaris
Phvul.011G200000 1.0kb upstream 1.0kb upstream 8178 true Chr11: 51499192-51507369 Phaseolus vulgaris
Phvul.011G200000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 51506370-51507369 Phaseolus vulgaris
Phvul.011G200000 1.0kb downstream 1.0kb downstream 8178 true Chr11: 51498192-51506369 Phaseolus vulgaris
Phvul.011G200000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 51498192-51499191 Phaseolus vulgaris
Phvul.011G200000 2.0kb upstream 2.0kb upstream 9178 true Chr11: 51499192-51508369 Phaseolus vulgaris
Phvul.011G200000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 51506370-51508369 Phaseolus vulgaris
Phvul.011G200000 2.0kb downstream 2.0kb downstream 9178 true Chr11: 51497192-51506369 Phaseolus vulgaris
Phvul.011G200000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 51497192-51499191 Phaseolus vulgaris
Phvul.011G200000 5.0kb upstream 5.0kb upstream 12178 true Chr11: 51499192-51511369 Phaseolus vulgaris
Phvul.011G200000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 51506370-51511369 Phaseolus vulgaris
Phvul.011G200000 5.0kb downstream 5.0kb downstream 12178 true Chr11: 51494192-51506369 Phaseolus vulgaris
Phvul.011G200000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 51494192-51499191 Phaseolus vulgaris
Phvul.011G200000 10.0kb upstream 10.0kb upstream 17178 true Chr11: 51499192-51516369 Phaseolus vulgaris
Phvul.011G200000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 51506370-51516369 Phaseolus vulgaris
Phvul.011G200000 10.0kb downstream 10.0kb downstream 17178 true Chr11: 51489192-51506369 Phaseolus vulgaris
Phvul.011G200000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 51489192-51499191 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302988 5265 Fabidae View MSA
124061439 5270 Rosid View MSA
123738649 5271 Pentapetalae View MSA
122785765 5272 Eudicot View MSA
122046431 5273 Angiosperm View MSA
121344700 5274 Embryophyte View MSA
123426720 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.34789 0.0 15.1392    
cufflinks 4.98657 0.0 20.0674    
cufflinks 1.87404 0.0 8.32079   Low
cufflinks 4.16791 0.0 15.4264    
cufflinks 3.89395 0.0 14.1794    
cufflinks 2.21222 0.0 11.1244   Low
cufflinks 3.57897 0.0 13.6607    
cufflinks 6.22213 0.0 26.602   High
cufflinks 3.98293 0.0 16.9906    
cufflinks 4.38391 0.0 18.3122    
cufflinks 4.24021 0.0 18.0042    

0 Strain