Gene : Phvul.011G206800 P. vulgaris v2.1
Defline:  (1 of 1) K01190 - beta-galactosidase (lacZ) Genomic Order:  2063
Name:  ? Phvul.011G206800 Secondary Identifier:  ? PAC:37156844
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G206800 0.5kb upstream 0.5kb upstream 9638 true Chr11: 52385968-52395605 Phaseolus vulgaris
Phvul.011G206800 0.5kb upstream 0.5kb upstream 500 false Chr11: 52385968-52386467 Phaseolus vulgaris
Phvul.011G206800 0.5kb downstream 0.5kb downstream 9638 true Chr11: 52386468-52396105 Phaseolus vulgaris
Phvul.011G206800 0.5kb downstream 0.5kb downstream 500 false Chr11: 52395606-52396105 Phaseolus vulgaris
Phvul.011G206800 1.0kb upstream 1.0kb upstream 10138 true Chr11: 52385468-52395605 Phaseolus vulgaris
Phvul.011G206800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 52385468-52386467 Phaseolus vulgaris
Phvul.011G206800 1.0kb downstream 1.0kb downstream 10138 true Chr11: 52386468-52396605 Phaseolus vulgaris
Phvul.011G206800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 52395606-52396605 Phaseolus vulgaris
Phvul.011G206800 2.0kb upstream 2.0kb upstream 11138 true Chr11: 52384468-52395605 Phaseolus vulgaris
Phvul.011G206800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 52384468-52386467 Phaseolus vulgaris
Phvul.011G206800 2.0kb downstream 2.0kb downstream 11138 true Chr11: 52386468-52397605 Phaseolus vulgaris
Phvul.011G206800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 52395606-52397605 Phaseolus vulgaris
Phvul.011G206800 5.0kb upstream 5.0kb upstream 14138 true Chr11: 52381468-52395605 Phaseolus vulgaris
Phvul.011G206800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 52381468-52386467 Phaseolus vulgaris
Phvul.011G206800 5.0kb downstream 5.0kb downstream 14138 true Chr11: 52386468-52400605 Phaseolus vulgaris
Phvul.011G206800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 52395606-52400605 Phaseolus vulgaris
Phvul.011G206800 10.0kb upstream 10.0kb upstream 19138 true Chr11: 52376468-52395605 Phaseolus vulgaris
Phvul.011G206800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 52376468-52386467 Phaseolus vulgaris
Phvul.011G206800 10.0kb downstream 10.0kb downstream 19138 true Chr11: 52386468-52405605 Phaseolus vulgaris
Phvul.011G206800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 52395606-52405605 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300665 5265 Fabidae View MSA
124060617 5270 Rosid View MSA
123738127 5271 Pentapetalae View MSA
122786058 5272 Eudicot View MSA
122041739 5273 Angiosperm View MSA
121344656 5274 Embryophyte View MSA
123424001 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.07514 0.0 11.0983   Low
cufflinks 5.76059 0.0 15.2704    
cufflinks 11.1441 0.0 28.8108   High
cufflinks 4.31479 0.0 11.782   Low
cufflinks 6.75325 0.0 17.8074    
cufflinks 9.62158 0.0 24.9274    
cufflinks 7.0911 0.0 18.5798    
cufflinks 8.11801 0.0 21.0975    
cufflinks 8.83097 0.0 22.9523    
cufflinks 13.5818 0.0 35.1284   High
cufflinks 4.9645 0.0 13.3642    

0 Strain