Gene : Phvul.011G196600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11413:SF55 - CYSTEINE PROTEINASE INHIBITOR 6 Genomic Order:  1957
Name:  ? Phvul.011G196600 Secondary Identifier:  ? PAC:37157244
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G196600 0.5kb upstream 0.5kb upstream 4313 true Chr11: 51044959-51049271 Phaseolus vulgaris
Phvul.011G196600 0.5kb upstream 0.5kb upstream 500 false Chr11: 51048772-51049271 Phaseolus vulgaris
Phvul.011G196600 0.5kb downstream 0.5kb downstream 4313 true Chr11: 51044459-51048771 Phaseolus vulgaris
Phvul.011G196600 0.5kb downstream 0.5kb downstream 500 false Chr11: 51044459-51044958 Phaseolus vulgaris
Phvul.011G196600 1.0kb upstream 1.0kb upstream 4813 true Chr11: 51044959-51049771 Phaseolus vulgaris
Phvul.011G196600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 51048772-51049771 Phaseolus vulgaris
Phvul.011G196600 1.0kb downstream 1.0kb downstream 4813 true Chr11: 51043959-51048771 Phaseolus vulgaris
Phvul.011G196600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 51043959-51044958 Phaseolus vulgaris
Phvul.011G196600 2.0kb upstream 2.0kb upstream 5813 true Chr11: 51044959-51050771 Phaseolus vulgaris
Phvul.011G196600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 51048772-51050771 Phaseolus vulgaris
Phvul.011G196600 2.0kb downstream 2.0kb downstream 5813 true Chr11: 51042959-51048771 Phaseolus vulgaris
Phvul.011G196600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 51042959-51044958 Phaseolus vulgaris
Phvul.011G196600 5.0kb upstream 5.0kb upstream 8813 true Chr11: 51044959-51053771 Phaseolus vulgaris
Phvul.011G196600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 51048772-51053771 Phaseolus vulgaris
Phvul.011G196600 5.0kb downstream 5.0kb downstream 8813 true Chr11: 51039959-51048771 Phaseolus vulgaris
Phvul.011G196600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 51039959-51044958 Phaseolus vulgaris
Phvul.011G196600 10.0kb upstream 10.0kb upstream 13813 true Chr11: 51044959-51058771 Phaseolus vulgaris
Phvul.011G196600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 51048772-51058771 Phaseolus vulgaris
Phvul.011G196600 10.0kb downstream 10.0kb downstream 13813 true Chr11: 51034959-51048771 Phaseolus vulgaris
Phvul.011G196600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 51034959-51044958 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308469 5265 Fabidae View MSA
124074008 5270 Rosid View MSA
123740864 5271 Pentapetalae View MSA
122789920 5272 Eudicot View MSA
122041687 5273 Angiosperm View MSA
121347429 5274 Embryophyte View MSA
123424301 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 157.878 0.0 442.851 High High
cufflinks 50.2411 0.0 130.159 High  
cufflinks 34.7596 0.0 89.9678    
cufflinks 99.072 0.0 266.331 High  
cufflinks 55.3939 0.0 143.73 High  
cufflinks 37.0788 0.0 95.8778 High  
cufflinks 42.6873 0.0 110.379 High  
cufflinks 28.7349 0.0 74.6837 High Low
cufflinks 33.8672 0.0 87.5955 High  
cufflinks 108.562 0.0 293.443 High High
cufflinks 79.4818 0.0 209.9 High  

0 Strain