Gene : Phvul.011G172600 P. vulgaris v2.1
Defline:  (1 of 75) K14488 - SAUR family protein (SAUR) Genomic Order:  1709
Name:  ? Phvul.011G172600 Secondary Identifier:  ? PAC:37154857
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G172600 0.5kb upstream 0.5kb upstream 1330 true Chr11: 48056309-48057638 Phaseolus vulgaris
Phvul.011G172600 0.5kb upstream 0.5kb upstream 500 false Chr11: 48056309-48056808 Phaseolus vulgaris
Phvul.011G172600 0.5kb downstream 0.5kb downstream 1330 true Chr11: 48056809-48058138 Phaseolus vulgaris
Phvul.011G172600 0.5kb downstream 0.5kb downstream 500 false Chr11: 48057639-48058138 Phaseolus vulgaris
Phvul.011G172600 1.0kb upstream 1.0kb upstream 1830 true Chr11: 48055809-48057638 Phaseolus vulgaris
Phvul.011G172600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 48055809-48056808 Phaseolus vulgaris
Phvul.011G172600 1.0kb downstream 1.0kb downstream 1830 true Chr11: 48056809-48058638 Phaseolus vulgaris
Phvul.011G172600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 48057639-48058638 Phaseolus vulgaris
Phvul.011G172600 2.0kb upstream 2.0kb upstream 2830 true Chr11: 48054809-48057638 Phaseolus vulgaris
Phvul.011G172600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 48054809-48056808 Phaseolus vulgaris
Phvul.011G172600 2.0kb downstream 2.0kb downstream 2830 true Chr11: 48056809-48059638 Phaseolus vulgaris
Phvul.011G172600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 48057639-48059638 Phaseolus vulgaris
Phvul.011G172600 5.0kb upstream 5.0kb upstream 5830 true Chr11: 48051809-48057638 Phaseolus vulgaris
Phvul.011G172600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 48051809-48056808 Phaseolus vulgaris
Phvul.011G172600 5.0kb downstream 5.0kb downstream 5830 true Chr11: 48056809-48062638 Phaseolus vulgaris
Phvul.011G172600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 48057639-48062638 Phaseolus vulgaris
Phvul.011G172600 10.0kb upstream 10.0kb upstream 10830 true Chr11: 48046809-48057638 Phaseolus vulgaris
Phvul.011G172600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 48046809-48056808 Phaseolus vulgaris
Phvul.011G172600 10.0kb downstream 10.0kb downstream 10830 true Chr11: 48056809-48067638 Phaseolus vulgaris
Phvul.011G172600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 48057639-48067638 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309775 5265 Fabidae View MSA
124071169 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.8239 0.0 101.529 High High
cufflinks 17.6245 0.0 49.125    
cufflinks 2.3052 0.0 8.10558   Low
cufflinks 6.27526 0.0 19.1379    
cufflinks 19.4011 0.0 53.2739    
cufflinks 3.24012 0.0 10.9121   Low
cufflinks 11.8032 0.0 33.9608    
cufflinks 20.7657 0.0 57.2688    
cufflinks 12.4226 0.0 35.5767    
cufflinks 9.99328 0.0 29.405    
cufflinks 13.4146 0.0 38.0237    

0 Strain