Gene : Phvul.011G166500 P. vulgaris v2.1
Defline:  (1 of 24) PF00197 - Trypsin and protease inhibitor (Kunitz_legume) Genomic Order:  1646
Name:  ? Phvul.011G166500 Secondary Identifier:  ? PAC:37156792
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G166500 0.5kb upstream 0.5kb upstream 1124 true Chr11: 47070120-47071243 Phaseolus vulgaris
Phvul.011G166500 0.5kb upstream 0.5kb upstream 500 false Chr11: 47070744-47071243 Phaseolus vulgaris
Phvul.011G166500 0.5kb downstream 0.5kb downstream 1124 true Chr11: 47069620-47070743 Phaseolus vulgaris
Phvul.011G166500 0.5kb downstream 0.5kb downstream 500 false Chr11: 47069620-47070119 Phaseolus vulgaris
Phvul.011G166500 1.0kb upstream 1.0kb upstream 1624 true Chr11: 47070120-47071743 Phaseolus vulgaris
Phvul.011G166500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 47070744-47071743 Phaseolus vulgaris
Phvul.011G166500 1.0kb downstream 1.0kb downstream 1624 true Chr11: 47069120-47070743 Phaseolus vulgaris
Phvul.011G166500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 47069120-47070119 Phaseolus vulgaris
Phvul.011G166500 2.0kb upstream 2.0kb upstream 2624 true Chr11: 47070120-47072743 Phaseolus vulgaris
Phvul.011G166500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 47070744-47072743 Phaseolus vulgaris
Phvul.011G166500 2.0kb downstream 2.0kb downstream 2624 true Chr11: 47068120-47070743 Phaseolus vulgaris
Phvul.011G166500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 47068120-47070119 Phaseolus vulgaris
Phvul.011G166500 5.0kb upstream 5.0kb upstream 5624 true Chr11: 47070120-47075743 Phaseolus vulgaris
Phvul.011G166500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 47070744-47075743 Phaseolus vulgaris
Phvul.011G166500 5.0kb downstream 5.0kb downstream 5624 true Chr11: 47065120-47070743 Phaseolus vulgaris
Phvul.011G166500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 47065120-47070119 Phaseolus vulgaris
Phvul.011G166500 10.0kb upstream 10.0kb upstream 10624 true Chr11: 47070120-47080743 Phaseolus vulgaris
Phvul.011G166500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 47070744-47080743 Phaseolus vulgaris
Phvul.011G166500 10.0kb downstream 10.0kb downstream 10624 true Chr11: 47060120-47070743 Phaseolus vulgaris
Phvul.011G166500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 47060120-47070119 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309979 5265 Fabidae View MSA
124070415 5270 Rosid View MSA
123749279 5271 Pentapetalae View MSA
122795954 5272 Eudicot View MSA
122043570 5273 Angiosperm View MSA
121310150 5274 Embryophyte View MSA
123347719 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.433 0.0 67.0824    
cufflinks 13.6079 0.0 39.5237    
cufflinks 0.265612 0.0 1.1285 Low Low
cufflinks 10.654 0.0 31.7896    
cufflinks 1.22215 0.0 4.59276    
cufflinks 63.3961 0.0 164.242 High High
cufflinks 16.0083 0.0 45.5483    
cufflinks 13.7871 0.0 40.1929    
cufflinks 1.81896 0.0 6.56649    
cufflinks 0.325844 0.0 1.36652   Low
cufflinks 11.9385 0.0 35.1361    

0 Strain