Gene : Phvul.011G166200 P. vulgaris v2.1
Defline:  (1 of 3) K10956 - protein transport protein SEC61 subunit alpha (SEC61A) Genomic Order:  1643
Name:  ? Phvul.011G166200 Secondary Identifier:  ? PAC:37156653
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G166200 0.5kb upstream 0.5kb upstream 4831 true Chr11: 47016505-47021335 Phaseolus vulgaris
Phvul.011G166200 0.5kb upstream 0.5kb upstream 500 false Chr11: 47020836-47021335 Phaseolus vulgaris
Phvul.011G166200 0.5kb downstream 0.5kb downstream 4831 true Chr11: 47016005-47020835 Phaseolus vulgaris
Phvul.011G166200 0.5kb downstream 0.5kb downstream 500 false Chr11: 47016005-47016504 Phaseolus vulgaris
Phvul.011G166200 1.0kb upstream 1.0kb upstream 5331 true Chr11: 47016505-47021835 Phaseolus vulgaris
Phvul.011G166200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 47020836-47021835 Phaseolus vulgaris
Phvul.011G166200 1.0kb downstream 1.0kb downstream 5331 true Chr11: 47015505-47020835 Phaseolus vulgaris
Phvul.011G166200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 47015505-47016504 Phaseolus vulgaris
Phvul.011G166200 2.0kb upstream 2.0kb upstream 6331 true Chr11: 47016505-47022835 Phaseolus vulgaris
Phvul.011G166200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 47020836-47022835 Phaseolus vulgaris
Phvul.011G166200 2.0kb downstream 2.0kb downstream 6331 true Chr11: 47014505-47020835 Phaseolus vulgaris
Phvul.011G166200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 47014505-47016504 Phaseolus vulgaris
Phvul.011G166200 5.0kb upstream 5.0kb upstream 9331 true Chr11: 47016505-47025835 Phaseolus vulgaris
Phvul.011G166200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 47020836-47025835 Phaseolus vulgaris
Phvul.011G166200 5.0kb downstream 5.0kb downstream 9331 true Chr11: 47011505-47020835 Phaseolus vulgaris
Phvul.011G166200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 47011505-47016504 Phaseolus vulgaris
Phvul.011G166200 10.0kb upstream 10.0kb upstream 14331 true Chr11: 47016505-47030835 Phaseolus vulgaris
Phvul.011G166200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 47020836-47030835 Phaseolus vulgaris
Phvul.011G166200 10.0kb downstream 10.0kb downstream 14331 true Chr11: 47006505-47020835 Phaseolus vulgaris
Phvul.011G166200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 47006505-47016504 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303091 5265 Fabidae View MSA
124061120 5270 Rosid View MSA
123743159 5271 Pentapetalae View MSA
122792380 5272 Eudicot View MSA
122043956 5273 Angiosperm View MSA
121349680 5274 Embryophyte View MSA
123426638 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 78.7827 0.0 216.336 High  
cufflinks 120.848 0.0 347.94 High High
cufflinks 42.5116 0.0 111.486 High Low
cufflinks 98.5409 0.0 274.499 High  
cufflinks 79.2814 0.0 217.168 High  
cufflinks 73.1956 0.0 199.64 High  
cufflinks 81.8603 0.0 225.232 High  
cufflinks 98.7457 0.0 278.677 High  
cufflinks 120.521 0.0 344.426 High High
cufflinks 45.4362 0.0 119.336 High Low
cufflinks 86.8413 0.0 239.591 High  

0 Strain