Gene : est_orfs.Chr_11_3194_3200535:1 M. sp RCC299 v3.0
Defline:  (1 of 4) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt) Genomic Order:  151
Name:  ? est_orfs.Chr_11_3194_3200535:1 Secondary Identifier:  ? PAC:27405363
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
est_orfs.Chr_11_3194_3200535:1 0.5kb upstream 0.5kb upstream 1578 true Chr_11: 294402-295979 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 0.5kb upstream 0.5kb upstream 500 false Chr_11: 294402-294901 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 0.5kb downstream 0.5kb downstream 1578 true Chr_11: 294902-296479 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 0.5kb downstream 0.5kb downstream 500 false Chr_11: 295980-296479 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 1.0kb upstream 1.0kb upstream 2078 true Chr_11: 293902-295979 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 1.0kb upstream 1.0kb upstream 1000 false Chr_11: 293902-294901 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 1.0kb downstream 1.0kb downstream 2078 true Chr_11: 294902-296979 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 1.0kb downstream 1.0kb downstream 1000 false Chr_11: 295980-296979 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 2.0kb upstream 2.0kb upstream 3078 true Chr_11: 292902-295979 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 2.0kb upstream 2.0kb upstream 2000 false Chr_11: 292902-294901 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 2.0kb downstream 2.0kb downstream 3078 true Chr_11: 294902-297979 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 2.0kb downstream 2.0kb downstream 2000 false Chr_11: 295980-297979 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 5.0kb upstream 5.0kb upstream 6078 true Chr_11: 289902-295979 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 5.0kb upstream 5.0kb upstream 5000 false Chr_11: 289902-294901 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 5.0kb downstream 5.0kb downstream 6078 true Chr_11: 294902-300979 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 5.0kb downstream 5.0kb downstream 5000 false Chr_11: 295980-300979 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 10.0kb upstream 10.0kb upstream 11078 true Chr_11: 284902-295979 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 10.0kb upstream 10.0kb upstream 10000 false Chr_11: 284902-294901 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 10.0kb downstream 10.0kb downstream 11078 true Chr_11: 294902-305979 Micromonas sp RCC299
est_orfs.Chr_11_3194_3200535:1 10.0kb downstream 10.0kb downstream 10000 false Chr_11: 295980-305979 Micromonas sp RCC299

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111454 5260 Chlorophyte View MSA
123427645 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier