Gene : Zm00008a039239 Z. mays PH207 v1.1
Defline:  (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Genomic Order:  300
Name:  ? Zm00008a039239 Secondary Identifier:  ? PAC:37215961
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zm00008a039239 0.5kb upstream 0.5kb upstream 16487 true chrUNKNOWN: 3773337-3789823 Zea mays PH207
Zm00008a039239 0.5kb upstream 0.5kb upstream 500 false chrUNKNOWN: 3773337-3773836 Zea mays PH207
Zm00008a039239 0.5kb downstream 0.5kb downstream 16487 true chrUNKNOWN: 3773837-3790323 Zea mays PH207
Zm00008a039239 0.5kb downstream 0.5kb downstream 500 false chrUNKNOWN: 3789824-3790323 Zea mays PH207
Zm00008a039239 1.0kb upstream 1.0kb upstream 16987 true chrUNKNOWN: 3772837-3789823 Zea mays PH207
Zm00008a039239 1.0kb upstream 1.0kb upstream 1000 false chrUNKNOWN: 3772837-3773836 Zea mays PH207
Zm00008a039239 1.0kb downstream 1.0kb downstream 16987 true chrUNKNOWN: 3773837-3790823 Zea mays PH207
Zm00008a039239 1.0kb downstream 1.0kb downstream 1000 false chrUNKNOWN: 3789824-3790823 Zea mays PH207
Zm00008a039239 2.0kb upstream 2.0kb upstream 17987 true chrUNKNOWN: 3771837-3789823 Zea mays PH207
Zm00008a039239 2.0kb upstream 2.0kb upstream 2000 false chrUNKNOWN: 3771837-3773836 Zea mays PH207
Zm00008a039239 2.0kb downstream 2.0kb downstream 17987 true chrUNKNOWN: 3773837-3791823 Zea mays PH207
Zm00008a039239 2.0kb downstream 2.0kb downstream 2000 false chrUNKNOWN: 3789824-3791823 Zea mays PH207
Zm00008a039239 5.0kb upstream 5.0kb upstream 20987 true chrUNKNOWN: 3768837-3789823 Zea mays PH207
Zm00008a039239 5.0kb upstream 5.0kb upstream 5000 false chrUNKNOWN: 3768837-3773836 Zea mays PH207
Zm00008a039239 5.0kb downstream 5.0kb downstream 20987 true chrUNKNOWN: 3773837-3794823 Zea mays PH207
Zm00008a039239 5.0kb downstream 5.0kb downstream 5000 false chrUNKNOWN: 3789824-3794823 Zea mays PH207
Zm00008a039239 10.0kb upstream 10.0kb upstream 25987 true chrUNKNOWN: 3763837-3789823 Zea mays PH207
Zm00008a039239 10.0kb upstream 10.0kb upstream 10000 false chrUNKNOWN: 3763837-3773836 Zea mays PH207
Zm00008a039239 10.0kb downstream 10.0kb downstream 25987 true chrUNKNOWN: 3773837-3799823 Zea mays PH207
Zm00008a039239 10.0kb downstream 10.0kb downstream 10000 false chrUNKNOWN: 3789824-3799823 Zea mays PH207

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121861501 5273 Angiosperm View MSA
122137021 5267 Panicoideae View MSA
124430424 5269 Grass View MSA
121132182 5274 Embryophyte View MSA
123171307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier