Protein Family : PF03732 - Retrotransposon gag protein (Retrotrans_gag) 123171307

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  30

30 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
ChrUn.fgenesh.gene.63 (1 of 99) PF03732 - Retrotransposon gag protein (Retrotrans_gag) O. sativa v7.0 2716   ChrUn: 414510-417225
Zm00008a039239 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 15987   chrUNKNOWN: 3773837-3789823
Zm00008a039246 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 720   chrUNKNOWN: 3995515-3996234
Zm00008a039515 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 1518   chrUNKNOWN: 5982354-5983871
Zm00008a039279 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 1142   chrUNKNOWN: 4208462-4209603
Zm00008a039274 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 861   chrUNKNOWN: 4195817-4196677
Zm00008a039288 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 6068   chrUNKNOWN: 4319542-4325609
Zm00008a039262 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 1236   chrUNKNOWN: 4142345-4143580
Zm00008a039512 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 6681   chrUNKNOWN: 5942950-5949630
Zm00008a039229 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 1518   chrUNKNOWN: 3646610-3648127
Zm00008a039315 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 1047   chrUNKNOWN: 4495389-4496435
Zm00008a039299 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 1227   chrUNKNOWN: 4366434-4367660
Zm00008a039298 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 813   chrUNKNOWN: 4358864-4359676
Zm00008a039342 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 15004   chrUNKNOWN: 4666234-4681237
Zm00008a039327 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 696   chrUNKNOWN: 4586854-4587549
Zm00008a039021 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 690   chrUNKNOWN: 686385-687074
Zm00008a039027   Z. mays PH207 v1.1 414   chrUNKNOWN: 707951-708364
Zm00008a039019   Z. mays PH207 v1.1 8159   chrUNKNOWN: 678040-686198
Zm00008a039058   Z. mays PH207 v1.1 16093   chrUNKNOWN: 896838-912930
Zm00008a039432 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 1374   chrUNKNOWN: 5296973-5298346
Zm00008a039049   Z. mays PH207 v1.1 1359   chrUNKNOWN: 821775-823133
Zm00008a039047 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 1362   chrUNKNOWN: 815663-817024
Zm00008a038968 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 513   chrUNKNOWN: 296354-296866
Zm00008a038949 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 1518   chrUNKNOWN: 197024-198541
Zm00008a038998 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 1077   chrUNKNOWN: 537764-538840
Zm00008a038989 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 1518   chrUNKNOWN: 479705-481222
Zm00008a039169 (1 of 37) PTHR11439//PTHR11439:SF176 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED Z. mays PH207 v1.1 7786   chrUNKNOWN: 2734227-2742012
Zm00008a039096 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 14558   chrUNKNOWN: 1555620-1570177
Zm00008a039500 (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Z. mays PH207 v1.1 627   chrUNKNOWN: 5837642-5838268
Zm00008a039108   Z. mays PH207 v1.1 1171   chrUNKNOWN: 2060837-2062007

30 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
ChrUn.fgenesh.mRNA.63 O. sativa v7.0 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 1 5275 Viridiplantae
Zm00008a039246_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039239_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a038949_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039288_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039049_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039058_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039432_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039019_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039027_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039021_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039327_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039342_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039299_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039298_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039315_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039229_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039512_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039262_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039047_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039274_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039279_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039515_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a038998_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a038989_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039169_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039500_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039096_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a039108_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae
Zm00008a038968_P01 Z. mays PH207 v1.1 123171307 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 29 5275 Viridiplantae