Gene : Zm00008a039512 Z. mays PH207 v1.1
Defline:  (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Genomic Order:  573
Name:  ? Zm00008a039512 Secondary Identifier:  ? PAC:37215911
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zm00008a039512 0.5kb upstream 0.5kb upstream 7181 true chrUNKNOWN: 5942950-5950130 Zea mays PH207
Zm00008a039512 0.5kb upstream 0.5kb upstream 500 false chrUNKNOWN: 5949631-5950130 Zea mays PH207
Zm00008a039512 0.5kb downstream 0.5kb downstream 7181 true chrUNKNOWN: 5942450-5949630 Zea mays PH207
Zm00008a039512 0.5kb downstream 0.5kb downstream 500 false chrUNKNOWN: 5942450-5942949 Zea mays PH207
Zm00008a039512 1.0kb upstream 1.0kb upstream 7681 true chrUNKNOWN: 5942950-5950630 Zea mays PH207
Zm00008a039512 1.0kb upstream 1.0kb upstream 1000 false chrUNKNOWN: 5949631-5950630 Zea mays PH207
Zm00008a039512 1.0kb downstream 1.0kb downstream 7681 true chrUNKNOWN: 5941950-5949630 Zea mays PH207
Zm00008a039512 1.0kb downstream 1.0kb downstream 1000 false chrUNKNOWN: 5941950-5942949 Zea mays PH207
Zm00008a039512 2.0kb upstream 2.0kb upstream 8681 true chrUNKNOWN: 5942950-5951630 Zea mays PH207
Zm00008a039512 2.0kb upstream 2.0kb upstream 2000 false chrUNKNOWN: 5949631-5951630 Zea mays PH207
Zm00008a039512 2.0kb downstream 2.0kb downstream 8681 true chrUNKNOWN: 5940950-5949630 Zea mays PH207
Zm00008a039512 2.0kb downstream 2.0kb downstream 2000 false chrUNKNOWN: 5940950-5942949 Zea mays PH207
Zm00008a039512 5.0kb upstream 5.0kb upstream 11681 true chrUNKNOWN: 5942950-5954630 Zea mays PH207
Zm00008a039512 5.0kb upstream 5.0kb upstream 5000 false chrUNKNOWN: 5949631-5954630 Zea mays PH207
Zm00008a039512 5.0kb downstream 5.0kb downstream 11681 true chrUNKNOWN: 5937950-5949630 Zea mays PH207
Zm00008a039512 5.0kb downstream 5.0kb downstream 5000 false chrUNKNOWN: 5937950-5942949 Zea mays PH207
Zm00008a039512 10.0kb upstream 10.0kb upstream 16681 true chrUNKNOWN: 5942950-5959630 Zea mays PH207
Zm00008a039512 10.0kb upstream 10.0kb upstream 10000 false chrUNKNOWN: 5949631-5959630 Zea mays PH207
Zm00008a039512 10.0kb downstream 10.0kb downstream 16681 true chrUNKNOWN: 5932950-5949630 Zea mays PH207
Zm00008a039512 10.0kb downstream 10.0kb downstream 10000 false chrUNKNOWN: 5932950-5942949 Zea mays PH207

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121861501 5273 Angiosperm View MSA
122137021 5267 Panicoideae View MSA
124430424 5269 Grass View MSA
121132182 5274 Embryophyte View MSA
123171307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier