Gene : Zm00008a039169 Z. mays PH207 v1.1
Defline:  (1 of 37) PTHR11439//PTHR11439:SF176 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED Genomic Order:  230
Name:  ? Zm00008a039169 Secondary Identifier:  ? PAC:37215697
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zm00008a039169 0.5kb upstream 0.5kb upstream 8286 true chrUNKNOWN: 2733727-2742012 Zea mays PH207
Zm00008a039169 0.5kb upstream 0.5kb upstream 500 false chrUNKNOWN: 2733727-2734226 Zea mays PH207
Zm00008a039169 0.5kb downstream 0.5kb downstream 8286 true chrUNKNOWN: 2734227-2742512 Zea mays PH207
Zm00008a039169 0.5kb downstream 0.5kb downstream 500 false chrUNKNOWN: 2742013-2742512 Zea mays PH207
Zm00008a039169 1.0kb upstream 1.0kb upstream 8786 true chrUNKNOWN: 2733227-2742012 Zea mays PH207
Zm00008a039169 1.0kb upstream 1.0kb upstream 1000 false chrUNKNOWN: 2733227-2734226 Zea mays PH207
Zm00008a039169 1.0kb downstream 1.0kb downstream 8786 true chrUNKNOWN: 2734227-2743012 Zea mays PH207
Zm00008a039169 1.0kb downstream 1.0kb downstream 1000 false chrUNKNOWN: 2742013-2743012 Zea mays PH207
Zm00008a039169 2.0kb upstream 2.0kb upstream 9786 true chrUNKNOWN: 2732227-2742012 Zea mays PH207
Zm00008a039169 2.0kb upstream 2.0kb upstream 2000 false chrUNKNOWN: 2732227-2734226 Zea mays PH207
Zm00008a039169 2.0kb downstream 2.0kb downstream 9786 true chrUNKNOWN: 2734227-2744012 Zea mays PH207
Zm00008a039169 2.0kb downstream 2.0kb downstream 2000 false chrUNKNOWN: 2742013-2744012 Zea mays PH207
Zm00008a039169 5.0kb upstream 5.0kb upstream 12786 true chrUNKNOWN: 2729227-2742012 Zea mays PH207
Zm00008a039169 5.0kb upstream 5.0kb upstream 5000 false chrUNKNOWN: 2729227-2734226 Zea mays PH207
Zm00008a039169 5.0kb downstream 5.0kb downstream 12786 true chrUNKNOWN: 2734227-2747012 Zea mays PH207
Zm00008a039169 5.0kb downstream 5.0kb downstream 5000 false chrUNKNOWN: 2742013-2747012 Zea mays PH207
Zm00008a039169 10.0kb upstream 10.0kb upstream 17786 true chrUNKNOWN: 2724227-2742012 Zea mays PH207
Zm00008a039169 10.0kb upstream 10.0kb upstream 10000 false chrUNKNOWN: 2724227-2734226 Zea mays PH207
Zm00008a039169 10.0kb downstream 10.0kb downstream 17786 true chrUNKNOWN: 2734227-2752012 Zea mays PH207
Zm00008a039169 10.0kb downstream 10.0kb downstream 10000 false chrUNKNOWN: 2742013-2752012 Zea mays PH207

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121861501 5273 Angiosperm View MSA
122137021 5267 Panicoideae View MSA
124430424 5269 Grass View MSA
121132182 5274 Embryophyte View MSA
123171307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier