Gene : Zm00008a039288 Z. mays PH207 v1.1
Defline:  (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Genomic Order:  349
Name:  ? Zm00008a039288 Secondary Identifier:  ? PAC:37215701
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zm00008a039288 0.5kb upstream 0.5kb upstream 6568 true chrUNKNOWN: 4319042-4325609 Zea mays PH207
Zm00008a039288 0.5kb upstream 0.5kb upstream 500 false chrUNKNOWN: 4319042-4319541 Zea mays PH207
Zm00008a039288 0.5kb downstream 0.5kb downstream 6568 true chrUNKNOWN: 4319542-4326109 Zea mays PH207
Zm00008a039288 0.5kb downstream 0.5kb downstream 500 false chrUNKNOWN: 4325610-4326109 Zea mays PH207
Zm00008a039288 1.0kb upstream 1.0kb upstream 7068 true chrUNKNOWN: 4318542-4325609 Zea mays PH207
Zm00008a039288 1.0kb upstream 1.0kb upstream 1000 false chrUNKNOWN: 4318542-4319541 Zea mays PH207
Zm00008a039288 1.0kb downstream 1.0kb downstream 7068 true chrUNKNOWN: 4319542-4326609 Zea mays PH207
Zm00008a039288 1.0kb downstream 1.0kb downstream 1000 false chrUNKNOWN: 4325610-4326609 Zea mays PH207
Zm00008a039288 2.0kb upstream 2.0kb upstream 8068 true chrUNKNOWN: 4317542-4325609 Zea mays PH207
Zm00008a039288 2.0kb upstream 2.0kb upstream 2000 false chrUNKNOWN: 4317542-4319541 Zea mays PH207
Zm00008a039288 2.0kb downstream 2.0kb downstream 8068 true chrUNKNOWN: 4319542-4327609 Zea mays PH207
Zm00008a039288 2.0kb downstream 2.0kb downstream 2000 false chrUNKNOWN: 4325610-4327609 Zea mays PH207
Zm00008a039288 5.0kb upstream 5.0kb upstream 11068 true chrUNKNOWN: 4314542-4325609 Zea mays PH207
Zm00008a039288 5.0kb upstream 5.0kb upstream 5000 false chrUNKNOWN: 4314542-4319541 Zea mays PH207
Zm00008a039288 5.0kb downstream 5.0kb downstream 11068 true chrUNKNOWN: 4319542-4330609 Zea mays PH207
Zm00008a039288 5.0kb downstream 5.0kb downstream 5000 false chrUNKNOWN: 4325610-4330609 Zea mays PH207
Zm00008a039288 10.0kb upstream 10.0kb upstream 16068 true chrUNKNOWN: 4309542-4325609 Zea mays PH207
Zm00008a039288 10.0kb upstream 10.0kb upstream 10000 false chrUNKNOWN: 4309542-4319541 Zea mays PH207
Zm00008a039288 10.0kb downstream 10.0kb downstream 16068 true chrUNKNOWN: 4319542-4335609 Zea mays PH207
Zm00008a039288 10.0kb downstream 10.0kb downstream 10000 false chrUNKNOWN: 4325610-4335609 Zea mays PH207

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121861501 5273 Angiosperm View MSA
122137021 5267 Panicoideae View MSA
124430424 5269 Grass View MSA
121132182 5274 Embryophyte View MSA
123171307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier