Gene : Zm00008a039274 Z. mays PH207 v1.1
Defline:  (1 of 121) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Genomic Order:  335
Name:  ? Zm00008a039274 Secondary Identifier:  ? PAC:37216108
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zm00008a039274 0.5kb upstream 0.5kb upstream 1361 true chrUNKNOWN: 4195317-4196677 Zea mays PH207
Zm00008a039274 0.5kb upstream 0.5kb upstream 500 false chrUNKNOWN: 4195317-4195816 Zea mays PH207
Zm00008a039274 0.5kb downstream 0.5kb downstream 1361 true chrUNKNOWN: 4195817-4197177 Zea mays PH207
Zm00008a039274 0.5kb downstream 0.5kb downstream 500 false chrUNKNOWN: 4196678-4197177 Zea mays PH207
Zm00008a039274 1.0kb upstream 1.0kb upstream 1861 true chrUNKNOWN: 4194817-4196677 Zea mays PH207
Zm00008a039274 1.0kb upstream 1.0kb upstream 1000 false chrUNKNOWN: 4194817-4195816 Zea mays PH207
Zm00008a039274 1.0kb downstream 1.0kb downstream 1861 true chrUNKNOWN: 4195817-4197677 Zea mays PH207
Zm00008a039274 1.0kb downstream 1.0kb downstream 1000 false chrUNKNOWN: 4196678-4197677 Zea mays PH207
Zm00008a039274 2.0kb upstream 2.0kb upstream 2861 true chrUNKNOWN: 4193817-4196677 Zea mays PH207
Zm00008a039274 2.0kb upstream 2.0kb upstream 2000 false chrUNKNOWN: 4193817-4195816 Zea mays PH207
Zm00008a039274 2.0kb downstream 2.0kb downstream 2861 true chrUNKNOWN: 4195817-4198677 Zea mays PH207
Zm00008a039274 2.0kb downstream 2.0kb downstream 2000 false chrUNKNOWN: 4196678-4198677 Zea mays PH207
Zm00008a039274 5.0kb upstream 5.0kb upstream 5861 true chrUNKNOWN: 4190817-4196677 Zea mays PH207
Zm00008a039274 5.0kb upstream 5.0kb upstream 5000 false chrUNKNOWN: 4190817-4195816 Zea mays PH207
Zm00008a039274 5.0kb downstream 5.0kb downstream 5861 true chrUNKNOWN: 4195817-4201677 Zea mays PH207
Zm00008a039274 5.0kb downstream 5.0kb downstream 5000 false chrUNKNOWN: 4196678-4201677 Zea mays PH207
Zm00008a039274 10.0kb upstream 10.0kb upstream 10861 true chrUNKNOWN: 4185817-4196677 Zea mays PH207
Zm00008a039274 10.0kb upstream 10.0kb upstream 10000 false chrUNKNOWN: 4185817-4195816 Zea mays PH207
Zm00008a039274 10.0kb downstream 10.0kb downstream 10861 true chrUNKNOWN: 4195817-4206677 Zea mays PH207
Zm00008a039274 10.0kb downstream 10.0kb downstream 10000 false chrUNKNOWN: 4196678-4206677 Zea mays PH207

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121861501 5273 Angiosperm View MSA
122137021 5267 Panicoideae View MSA
124430424 5269 Grass View MSA
121132182 5274 Embryophyte View MSA
123171307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier