Gene : Potri.001G001100 P. trichocarpa v3.1

Defline:  (1 of 37) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  10
Name:  ? Potri.001G001100 Secondary Identifier:  ? PAC:37273775

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G001100 0.5kb upstream 0.5kb upstream 2334 true Chr01: 92475-94808 Populus trichocarpa
Potri.001G001100 0.5kb upstream 0.5kb upstream 500 false Chr01: 92475-92974 Populus trichocarpa
Potri.001G001100 0.5kb downstream 0.5kb downstream 2334 true Chr01: 92975-95308 Populus trichocarpa
Potri.001G001100 0.5kb downstream 0.5kb downstream 500 false Chr01: 94809-95308 Populus trichocarpa
Potri.001G001100 1.0kb upstream 1.0kb upstream 2834 true Chr01: 91975-94808 Populus trichocarpa
Potri.001G001100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 91975-92974 Populus trichocarpa
Potri.001G001100 1.0kb downstream 1.0kb downstream 2834 true Chr01: 92975-95808 Populus trichocarpa
Potri.001G001100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 94809-95808 Populus trichocarpa
Potri.001G001100 2.0kb upstream 2.0kb upstream 3834 true Chr01: 90975-94808 Populus trichocarpa
Potri.001G001100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 90975-92974 Populus trichocarpa
Potri.001G001100 2.0kb downstream 2.0kb downstream 3834 true Chr01: 92975-96808 Populus trichocarpa
Potri.001G001100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 94809-96808 Populus trichocarpa
Potri.001G001100 5.0kb upstream 5.0kb upstream 6834 true Chr01: 87975-94808 Populus trichocarpa
Potri.001G001100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 87975-92974 Populus trichocarpa
Potri.001G001100 5.0kb downstream 5.0kb downstream 6834 true Chr01: 92975-99808 Populus trichocarpa
Potri.001G001100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 94809-99808 Populus trichocarpa
Potri.001G001100 10.0kb upstream 10.0kb upstream 11834 true Chr01: 82975-94808 Populus trichocarpa
Potri.001G001100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 82975-92974 Populus trichocarpa
Potri.001G001100 10.0kb downstream 10.0kb downstream 11834 true Chr01: 92975-104808 Populus trichocarpa
Potri.001G001100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 94809-104808 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464022 5262 Malpighiales View MSA
124248581 5268 Malvidae View MSA
124072137 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain